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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | B 1 (A) | polymer(polypeptide(L)) [203 aa] | ATP-dependent RNA helicase cgh-1 :CGH1_CAEEL | |
2 | b | D 1 (A) | non-polymer(GOL) | GLYCEROL | 37L 38G(T) 63I(K) (identity: 33.3 %/37.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7dtk_B_1 identity=37.7% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* * * * ** ** * * * * * * ***** **** ** * : 7dtk_B_1 35:FEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAIQ-------------------------------: 103 SecStr :GGGSS HHHHHHHHHTT S HHHHHHHHHHHTT EEEE SSHHHHHHHHHHHHHH TTS S -------------------------------: ExpBur :beebebeeebeebbeeeebeebeebbeebbebbbeeebbbbbbeeeeebbbbbbbbbbeebeeeeebbb-------------------------------: Contact : bb b queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 7dtk_B_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPKALIVEPSRELAEQTL: 303 : * * * **** ** : 7dtk_B_1 101:----------------------------------------------------------------------------------AIQAMVIVPTRELALQTS: 118 SecStr :----------------------------------------------------------------------------------S EEEE SSHHHHHHHH: ExpBur :----------------------------------------------------------------------------------bbbbbbbbeeeeebeebb: queryA 304:NNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQV: 403 : * * * ** ** * * * **** ** * ******* **** * * * * **: 7dtk_B_1 119:QICVELSKHI---QLKVMVTTGGTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLP------KERQV: 209 SecStr :HHHHHHTTTS--- EEEESTTS HHHHHHHHHS SEEEE HHHHHHHHHTT S TT EEEEESHHHHHHS TT HHHHHHTTS ------SS EE: ExpBur :ebbeebbeee---ebeebebbeeeeeeebeeebeeebbbbbbbbebbbebbeeeebebeebebbbbbbbbebbeebeeeebeebbeebe------eeebb: queryA 404:IVCSATLHSFDVKKLSEKIMHFPTWVD: 430 : *** * * ** * : 7dtk_B_1 210:MLYSATFPN-TVTSFMQKHMHKPYEIN: 235 SecStr :EEEES H-HHHHHHHHH S EEE : ExpBur :bbbbeeeee-ebeebbeebbeeeeebe: |