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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [424 aa] | Probable ATP-dependent RNA helicase DDX17 :DDX17_HUMAN | |
2 | b | C 1 (A) | non-polymer(MG) | MAGNESIUM ION | 325G (identity: 100.0 %/35.8 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6uv0_A_1 identity=35.8% |
queryA 25:PTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRA: 124 :** ** ** * * * * ****** * * * : 6uv0_A_1 86:PTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAI---------------------------------------------------------------: 122 SecStr : HHHHHHHHHHHTT EEEE TTS HHHHHHHHHH---------------------------------------------------------------: ExpBur :beebbbbbbbbbbbbbbbbbbbeeebebebbbbbbbb---------------------------------------------------------------: queryA 125:TKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKN: 224 : : 6uv0_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 225:QALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLP------------NAPKALIVEPSRELAEQTLNNIKQFKKY: 312 : * * * **** * * : 6uv0_A_1 123:------------------------------------------------------------VHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKC: 162 SecStr :------------------------------------------------------------HHHHTS TT SEEEE SSHHHHHHHHHHHHHHHTT: ExpBur :------------------------------------------------------------bbbeebeebeeeebbbbbbbbbbeebbeebeeebeebbee: queryA 313:IDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHS: 412 : * * ** * ** ** * ***** * ** ** ******* * * * ** * *** : 6uv0_A_1 163:---SRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQI------RPDRQTLMWSATWPK: 253 SecStr :---TT EEEE TTS HHHHHHHHHH SEEEE HHHHHHHHHTTS TT EEEETTHHHHHHTT HHHHHHHHTTS------ TTSEEEEEES H: ExpBur :---eebebbbbeeebeeeebeeebeebbbbbbbbbebbbebbeeeebbbebbbbbbbbbbbebbeeeeeeebeebbeeb------bebbbbbbbbeebbe: Contact : b queryA 413:FDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIF: 512 : * * * * * * * * * * ***: 6uv0_A_1 254:-EVRQLAEDFLRDYTQINVGNLELX--XXHNILQIVD----------------------------------VCMESEKDHKLIQLMEEIMXXXXXKTIIF: 316 SecStr :-HHHHHHHHH SS EEEEES ----- EEEEE----------------------------------E GGGHHHHHHHHHHT ----- EEEE: ExpBur :-ebeebbeebbeebbbbbbeebee-----eebebebe----------------------------------bbeeeebeeebeebbeeee-----ebbbb: queryA 513:CRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYVHRIGRVGRAERM: 612 : ** ** * * * *** ** * * * ** ** * * * *** * ******* * : 6uv0_A_1 317:VETKRRCDDLTRRMRRDG---------WPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDXXXXGLDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNK: 407 SecStr : S SHHHHHHHHHHHHTT--------- EEEE TTS HHHHHHHHHHHHHTSS EEEE ---- S EEEESS SSSHHHHHHHHHHHTSS : ExpBur :beebeebeebbeebeeee---------eebbbbbeeeeeeebeebbebbeeeebebbbbbe----eeeeeebbbbbbbbbbeeeeebeebbeebbeeeee: queryA 613:GLAISL: 618 :* * : 6uv0_A_1 408:GTAYTF: 413 SecStr : EEEEE: ExpBur :bbbebb: |