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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | E 1 (E) | polymer(polypeptide(L)) [426 aa] | ATP-dependent RNA helicase DDX19B :DD19B_HUMAN | |
2 | b | K 1 (E) | non-polymer(MG) | MAGNESIUM ION | 370D 371E (identity: 100.0 %/34.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6b4j_E_1 identity=34.7% |
queryA 256:VALSKAPDGYIVKSQHSGN--------AQVTQTKFLPNAPKALIVEPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTP: 347 : * * * ** ** * * * * * *** ** * * * * * * * ** ***: 6b4j_E_1 76:LMLAEPPQNLIAQSQ-SGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY--PELKLAYAVRGNKLERGQKISEQ---IVIGTP: 169 SecStr :HHHSSS EEEEE -TTSSHHHHHHHHHHHH TTS S EEEE SSHHHHHHHHHHHHHHTTT --TT EEEESTT TT S---EEEE H: ExpBur :bbeeeeebbbbbbbb-ebbbbbbbbbbbbbbebeeeeeebbbbbbbbeeebbebbbeebeebbeeb--eebebbbbbeeeeeeeeeebeeb---bbbbbb: Contact : b queryA 348:GRLDDLVSTGK-LNLSQVRFLVLDEADGLL-SQGYSDFINRMHNQIPQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVV: 445 :* * * * ****** ** * * * * *** * * * * ** * ** : 6b4j_E_1 170:GTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLP------RNCQMLLFSATFED-SVWKFAQKVVPDPNVIKLKREEETLDTIKQYY: 262 SecStr :HHHHHHHTTS S GGG EEEE HHHHTTSHHHHHHHHHHHHTS ------SSSEEEEEES H-HHHHHHHTT SS EEEEE TTEEEEE: ExpBur :ebbbebbeeeebbebeebebbbbbbbbbbbeeeebbeebbebbeebb------eebbbbbbbbeeee-ebeebbeebbeeebbbebeebebebebbebbb: Contact : bb queryA 446:VPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKGEYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCL: 545 :* * * * ** *** * * * *** *: 6b4j_E_1 263:VLCSSRDEKF-------------------------------QALCNLYGAITIA--------QAMIFCHTRKTASWL-------AAELSKEGHQVAL--L: 314 SecStr :EE SSHHHHH-------------------------------HHHHHHHTTS --------EEEEE SSHHHHHHH-------HHHHHHTT EEE--E: ExpBur :bebeeeeebb-------------------------------ebbeebbebbebe--------bbbbbbeeeebbeeb-------beebeeeeeebbe--b: queryA 546:HGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPDEK------QNYVHRIGRVGRAERMGLAISLVATEKEKVWYHVCSSRGKGCY: 639 : * * *** * * * * ***** * *** ** * * ***** ** *** * : 6b4j_E_1 315:SGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSK-----------------: 397 SecStr : TTS HHHHHHHHHHHHHTS SEEEESSSS S TTEEEEEESS B TTS B HHHHHHHHHSSS TT EEEEEEE SH-----------------: ExpBur :beebebeeebeebeebeeeebebbbbbebbbebbebeebebbbbbbbbeeeeeebebebbbbbbbbbbbeeeebbbbbbbeee-----------------: queryA 640:NTRLKEDGGCTIWYNEMQLLSEIEEHLNCTISQVEPD: 676 : * * * ** * * *: 6b4j_E_1 398:--------------HSMNILNRIQEHFNKKIERLDTD: 420 SecStr :--------------HHHHHHHHHHHHH EE SS: ExpBur :--------------ebbebbeebeeebeeebeebebe: |