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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [375 aa] | DDX6 :DDX6_HUMAN | |
2 | b | C 1 (A) | non-polymer(ACT) | ACETATE ION | 554R 555K(N) 558L(F) 575A(F) (identity: 25.0 %/36.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:4ct5_A_1 identity=36.0% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :* * ** * * ** **** * * * * * * ** ** ** : 4ct5_A_1 7:FEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLE-----------------------------------------: 65 SecStr :GGGG HHHHHHHHTTT S HHHHHHHHHHTTT EEEE SSS THHHHHHHHHH-----------------------------------------: ExpBur :beebebeeebbebbeeeebeebeeebeebbeebeeebbbbbebeeeeebbbbbbbbbbb-----------------------------------------: queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 4ct5_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAP---------KALIVEP: 294 : * *: 4ct5_A_1 66:------------------------------------------------------------------------------------RLDLKKDNIQAMVIVP: 81 SecStr :------------------------------------------------------------------------------------H TT S EEEE S: ExpBur :------------------------------------------------------------------------------------ebeeeeeebbbbbbbb: queryA 295:SRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRLDDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQIPQV: 394 : **** * * * * ** ** * * * **** ** * * ****** **** ** * * : 4ct5_A_1 82:TRELALQVSQICIQVSKHMGGAKV--MATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVAKVDHVQMIVLDEADKLLSQ---DFVQIMEDIILTL: 176 SecStr :SHHHHHHHHHHHHHHSTTSTT E--EEE SSS HHHHHHHTTS SEEEE HHHHHHHHHHT S TT EEEEESHHHHTST---TTHHHHHHHHHTS: ExpBur :eeebbeebbeebeebbeebeebbb--bebbeeeeeeebeeebeeebbbbbbbbebbbebbeeeebebeebebbbbbbbbebbee---eeeeebebbbeeb: queryA 395:TSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDRLWERLGKSHIRTDDVHAKDNTRPGANSPEMWSEAIKILKG: 494 : * * *** * * * * * * * ** * : 4ct5_A_1 177:P---KNRQILLYSATF-PLSVQKFMNSHLQKPYEINLMEELTLKGVTQYYAYV----TER------------QKVHCLNT---------LFSRL------: 241 SecStr : ---TT EEEEEESS - HHHHHHHHHT S EEES TT B TT EEEEEE ---- HH------------HHHHHHHH---------HHHHS------: ExpBur :b---eebbbbbbbbeb-eeebbebbeebbeebebbebeeebbbeebebbbbeb----eee------------ebbebbee---------bbeeb------: queryA 495:EYAVRAIKEHKMDQAIIFCRTKIDCDNLEQYFIQQGGGPDKKGHQFSCVCLHGDRKPHERKQNLERFKKGDVRFLICTDVAARGIDIHGVPYVINVTLPD: 594 : * **** * * * ** * * * * * * *** ***** * *** * : 4ct5_A_1 242:----------QINQSIIFCNSSQRVELLAKKISQLG---------YSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPK: 322 SecStr :---------- SEEEEE S HHHHHHHHHHHTTTT--------- EEE TTS HHHHHHHHHHHHTTS SEEEE S SS TTEEEEEESS S: ExpBur :----------ebebbbbbbeebeebeebbeebeeee---------eebeebbeebeeeebeebbebbeeeebebbbbbeebeebbbbebbbbbbbbbbbe: Contact : bb b b queryA 595:EKQNYVHRIGRVGRAERMGLAISLVA: 620 : * ***** ** **** * : 4ct5_A_1 323:LAETYLHRIGRSGRFGHLGLAINLIT: 348 SecStr :SHHHHHHHH B SS EEEEEE : ExpBur :ebeebbebbbbbbeeeeebbbbbbbb: |