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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(DDX1_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [232 aa] | Probable ATP-dependent RNA helicase DDX10 :DDX10_HUMAN | |
2 | b | B 1 (A) | non-polymer(MG) | MAGNESIUM ION | 371E (identity: 100.0 %/38.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:2pl3_A_1 identity=38.5% |
queryA 4:FSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYETLKDQQEGKKGKTTIKTGASVLNKWQMNPYDRGSAFA: 103 :** * * * ** * * * * *** ** ****** ** ** * : 2pl3_A_1 27:FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALY--------------------------------------: 88 SecStr :GGGS HHHHHHHHHTT B HHHHHHHHHHHTT EEEE TTS HHHHHHHHHHHHHH--------------------------------------: ExpBur :beebbbbeebeebbeeeeeeebeebbeebbbebbeeebbbbbbeeeeebebbbbbbbbbbbb--------------------------------------: queryA 104:IGSDGLCCQSREVKEWHGCRATKGLMKGKHYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDNYGEEFTMHDTIGCYLDIDKGHV: 203 : : 2pl3_A_1 -1:----------------------------------------------------------------------------------------------------: -1 SecStr :----------------------------------------------------------------------------------------------------: ExpBur :----------------------------------------------------------------------------------------------------: queryA 204:KFSKNGKDLGLAFEIPPHMKNQALFPACVLKNAELKFNFGEEEFKFPPKDGFVALSKAPDGYIVKSQHSGNAQVTQTKFLPNAPK-----------ALIV: 292 : ** : 2pl3_A_1 89:-------------------------------------------------------------------------------------RLQWTSTDGLGVLII: 103 SecStr :-------------------------------------------------------------------------------------HTT GGG EEEE: ExpBur :-------------------------------------------------------------------------------------beebeeeebbbbbbb: queryA 293:EPSRELAEQTLNNIKQFKKYIDNPKLRELLIIGGVAARDQLSVLENGVDIVVGTPGRL-DDLVSTGKLNLSQVRFLVLDEADGLLSQGYSDFINRMHNQI: 391 : * **** ** * * ***** * * * ***** * ******* * * * * : 2pl3_A_1 104:SPTRELAYQTFEVLRKVGK---NHDFSAGLIIGGXXLKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENL: 199 SecStr : SSHHHHHHHHHHHHHHTT---TSS EEEE -- HHHHHHH-TT SEEEE HHHHHHHHHH SS TT EEEETTHHHHHHTTTHHHHHHHHHTS: ExpBur :bbbeeebeebbbbbeebbe---ebebeebebebe--eeebeeeb-eebbbbbbbbebbbebbeebeebebeebebbbbbbbbebbeeeeeeebeebbeeb: Contact : b queryA 392:PQVTSDGKRLQVIVCSATLHSFDVKKLSEKIMHFPTWV: 429 :* * * *** ** * * *: 2pl3_A_1 200:P------KKRQTLLFSAT-QTKSVKDLARLSLKNPEYV: 230 SecStr : ------TTSEEEEEESS- HHHHHHHHHS SS EEE: ExpBur :e------eebbbbbbbbe-eeeebeebbeebbeeeeeb: |