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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (C) | polymer(polypeptide(L)) [906 aa] | Membrane-localized LRR receptor-like protein :A0A2I8B6R1_NICBE | |
2 | b | T 1 (C) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 494F(V) 517N (identity: 50.0 %/31.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7drc_B_1 identity=31.3% |
queryA 143:GLPESLTELSLIQ--NNIYNITKEGI--SRLINLKNLYLAWNCYFNKVCEKTNIE---------------------DGVFETLTNLELLSLSFNSLSHVP: 217 :***** ** ** * * * * ** * ** ** * * * * * : 7drc_B_1 449:GLPESMGQLSNLESFDASYNVLKGTITESHLSNLSSL-VDLDLSFNSLALKTSIDWLPPFQLQVINLPSCNLGPSFPKWLQSQNNYTVLDISLANISDAL: 547 SecStr :E GGGGG S EEE SS EEEE GGGGSS TT - EEE SSEEEE SS S SEEE TT B SS STTSS S SEEE TTS SB : ExpBur :bbbeebbebeebeebebbebebeeebeeebbeebeeb-eebebbebebebebeeebebebebeebebbebebbeebbebbeebeebebbbbbebebeeeb: queryA 218:PK----LPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFA------FQNLTQLRYLNLSSTSL--------: 299 :* ** * *** ** *** * * * * ** * * * *** : 7drc_B_1 548:PSWFSGLPPDIKILNLSNNQISGRVSDLIENAYDYMVIDLSSNN---FSGPLPLVP------TNVQIFYLHKNQFFGSISSICKSTTGATSLDLSHNQFS: 638 SecStr : SSTT TT EEE SS EE TTT TT EEE SSE---EEES ------TT EEE SSEEEE GGGSSS EEE SSEEE: ExpBur :beebeebbeebebbbbbebebeeebeebbeebeebbbbbbbbbe---bebebbebb------eebbbbbbeebebeeebeebbeeebebbbbbbbebebe: queryA 300:RKINAAWFKNMPHLKVLDLEFNYLVGEIASG---------------AFLTMLPRL------EILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYV: 378 : * * * ** * * * * *** * **** * * * * ** ** * ** : 7drc_B_1 639:GELPDCWM-NATNLAVLNLAYNNFSGKLPQSLGSLTNLEALYMRQNSFSGMLPSLSQCQSLQILDLGGNKLTGRIPAWIG-----TDLLNLRILSLR---: 729 SecStr :EE S TT-S SEEE SSEEEE GGGGG TT EEE SBEE S TT TT EEE BTT BSS THHH-----HT S EEE ---: ExpBur :eebbebbe-ebeebbbbbbbebebebebbebbbebeebbbbbbbebebeeebbebbebeebebbbbbbbebebebbebbb-----eebeebbbbbbb---: queryA 379:FQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQ: 478 :* ** * * * * * * * ** * ** * ** : 7drc_B_1 730:FNKFYGSISPIICQLQFLQILDLSANGLAG---KIPQCFNNFTLLH-QENGLGEPMEFLVQGFY--GKYPRHYSYLGNLLVQWKNQEAEYK--NPL----: 817 SecStr :SSB SB GGGGGGS EEE SS BS--- S GGG TTSS- SS EEEEEEEE--TTEEEEEE EEEEETTEEEEES-- TT----: ExpBur :ebebebebeeebbebeebbbbbbbebebee---ebbeebeebebbe-eeeeebeebebebeebe--eeeeeeeebebebbbeeeeeeeeee--bbb----: queryA 479:CAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANS-NAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHL: 577 : * * *** * * **** * * * *** * * * * ***** * ** * : 7drc_B_1 818:--TYLKTIDLSSNKLVGGIPKEMAEMRGLKSLNLSRNDLNGSIIKG--IGQMKMLESLDLSRNQLSGMIPKDLANLTFIGVLDLSNNHLSGRIPSSTQLQ: 913 SecStr :--TS EEE SS EE GGGTT TT EE SSEEEE TT--GGG TT BEE TTSEE SB GGGGG S B SS EE TTGG: ExpBur :--bebbbbbbbebebebebbebbbebebbbbbbbbebebeeebbeb--bbebebbebbbbbebebeeebbebbeebeebeebebbebebeeebbebeebe: Contact : b b queryA 578:EF: 579 : *: 7drc_B_1 914:TF: 915 SecStr :GS: ExpBur :eb: |