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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (C) | polymer(polypeptide(L)) [752 aa] | Membrane-localized LRR receptor-like protein :A0A2I8B6R1_NICBE | |
2 | b | G 1 (G) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 340E(Q) 362N (identity: 50.0 %/29.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7drb_B_1 identity=29.4% |
queryA 65:VTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDNQLPQI---PSGLPESLTELSLIQNNIYNI: 161 : * *** * * * * ** * ** * * * * * * ** ** * * * * : 7drb_B_1 266:LTSIDLSNNQLDGQIDDRFGNLMYLEHLNLANELNLKG-----GIPSSFGNLTRLRYLDMSNTRTY----QWLPELFVRLSGSRKTLEVLGLNDNSMFGS: 356 SecStr : EEE SS BS THHHH SS EEE S SB S----- S GGGGG S EEE TTS ---- BHHHHHHHHGGGTTT EEE SS BS : ExpBur :bebbbbbebebeeebeeebbebeebeebbbbebeebee-----bbbebbeebeebeebbbbebebe----bebbebbeebeebeeebebbbbbebebebe: queryA 162:TKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLP--SSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPR: 259 : * ** *** * * * ** * ** * * * *** * * * * ** * * : 7drb_B_1 357:LVD-VTRFSALKRLYLQKNVLNGFFMER-------FGQVSSLEYLDLSDNQMRGPLPDLALFPSLRELHLGSNHFNGRIPQGIGKLSQLKILDVSSN---: 445 SecStr :EE - TTSTT EEE TTS S EE -------SS SEEE SS SB GGG TT SEEE SS BS GGGGG SS EEE TTS---: ExpBur :beb-bbebeebeebebbebebebebebe-------eeeebebbbbbbbebebebebbebeebeebeebebbebebeeebbebbbebeebeebebbeb---: queryA 260:CFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLP--RLEILDLSFNYIKGSYPQHI: 357 : * * * * * * * * * * *** ** * ** * * * * : 7drb_B_1 446:----RLEGLPESMGQLSNLESF------DASYNVLKGT----ITESHLSNLSSLVDLDLSFNSLALKTS----IDWLPPFQLQVINLPSCNLGPSFPKWL: 527 SecStr :---- GGGTT S EE------E TTS EEE----E TTTTTT S EEE TT EEEE ----TT S SEEE TTEE SS GGG: ExpBur :----ebebbbebbbebeebeeb------ebbebebeee----beeebbeebeebeebbbbebebbbebe----eebebebebeebebbebebbeebbebb: Contact : b queryA 358:NISRNFSKL-LSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS---PLVKDT--------RQSYANSS: 445 : * * ** * * * ** * * * * * ** * * *** * *: 7drb_B_1 528:QSQNNYTVLDISLANI-------SDALPSWFSGLP--PDIKILNLSNNQISGRVSDLIENAYDYMVIDLSSNNFSGPLPLVPTNVQIFYLHKNQFFGSIS: 618 SecStr :GS S SEEE SS ------- SB SGGGG --TT EEE SS EEETTTTS S S SEEE SSEEEES SS SEEE SSEE S T: ExpBur :eebeebebbbbbebeb-------eeebbeebeebb--eebebbbbbebebeeebeeebeeeeebbbbbbbebebebebbebbeebbbbbbbebebeeebe: Contact : b queryA 446:SFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQC---AAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRL: 542 :* * * * * * * * * * * * * * ** * * *** * *: 7drb_B_1 619:SICKSTTGATSLDLSHN------QFSGEL--PDCWMNATNLAVLNLAYNNFSGKLPQSLGSLTNLEALYMRQNSFSGML--PSLSQCQSLQILDLGGNKL: 708 SecStr :TTTTS SEEE SS------ S -- S GGGSTT SEEE SS EE GGGGG SB SEEE TT EE S -- TT B SEEE TT : ExpBur :ebbeeebebbbbbbbeb------ebeeeb--bebbeebeebbbbbbbebebebebbebbbebeebebbbbeebebebeb--bebeebeebebbbbbebeb: queryA 543:DFDNASAL-TELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNI: 596 : * * * * * * * * * * * * ** * : 7drb_B_1 709:TGRIPAWIGTDLLNLRILSLRFNKFYGSISPIICQLQFLQ------ILDLSANGL: 757 SecStr :BS THHHHT SEEE SSB S GGGGG S ------EEE SS : ExpBur :ebebbebbbeebeebbbbbbeebebeeeeeeebeebeeee------eeeeeebee: |