Protein Model on 7crf_B_1_F_1
(TEMPLATE: 
7crf
)Protein Model on 7crf_B_1_F_1
(TEMPLATE: 7crf
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [751 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | F 1 (F) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 226K 228F 230S 250L 252D 254S 291Y 293N 462D 464H 465S 466N 467F 468Y (identity: 100.0 %/94.3 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:7crf_B_1 identity=94.3% |
queryA 32:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELL: 131
:******************************************************************** ********************:
7crf_B_1 10:RSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXNGLNITDGAFLNLKNLRELL: 109
SecStr : SSSEEEE SSSEEEE SS SS S TTEEEEE SS EE TTTTSS TT EEE S ------------ EE TTSSTT TT EEE:
ExpBur :beebbbeeeeeeebbbebeebebeebbeebeeebbebebbebebeebeeebbeebeebeebbbbebbe------------eebebeeebbeebeebeebb:
queryA 132:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 231
:****************************************************************************************************:
7crf_B_1 110:LEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSN: 209
SecStr : SS SS SS TT SEEE SS EE HHHHTT TT SEEE SSSSS SS SS EE TTTTTT TT EEE SS SS S TT SEEE TT:
ExpBur :bbebebeebbeebbebbeebbbbebebbebeeebbeebeebebbebbbbbbeeeebeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebbb:
Contact : b b b
queryA 232:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 331
:****************************************************************************************************:
7crf_B_1 210:TQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGA: 309
SecStr :S EE TTTTSS TT EEE TTSS SS SS GGG EE TTTTTT TT EEE SS S GGGGTT TT EEE SS HHHHHS S:
ExpBur :bebeebeeeebeebeebbbbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbbbebbebbeebe:
Contact : b b b b b
queryA 332:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 431
:****************************************************************************************************:
7crf_B_1 310:FLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS: 409
SecStr :GGGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGGGGSS TT EEE S EE GGGGSS SS EEE SS :
ExpBur :bbeebeebeebbbbbbeeeeeeeeebebbeebbebeebebbbbbbbbbeebeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebebe:
queryA 432:PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 531
:***** ************************************************************************:
7crf_B_1 410:PLVKDXXXXXXXXXXXXXXXXXXXXXXXEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPH: 509
SecStr : ----------------------- TTS SSS S SS HHHHTTS EEE TTS SS TTTTSS SEEE SS B S SSTTSTT:
ExpBur :bbeee-----------------------eeebeeebbbeeeebbeeebeeeeebbbbbebebeebbebbbeebbebbbbbbbebebebebebebbeebee:
Contact : b bbbbb
queryA 532:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 631
:****************************************************************************************************:
7crf_B_1 510:VKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRY: 609
SecStr : EEE SS B TTTTTT TT EEE S HHHHT TTS GGGGG SS EEE TT SS S EESS EEE TTS HHHHTT TT TT:
ExpBur :bebbbbbebebbbeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebebbebbbeebeeeeebebebbeebbbbbbbbbebbeeeeeeb:
queryA 632:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 731
:****************************************************************************************************:
7crf_B_1 610:ISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGF: 709
SecStr :TTTTTEETT EEE SS S HHHHTTS TT SEEE SS S GGGGGG TT EEE SS S GGGT S EEE SS TTT:
ExpBur :bebbeebeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeebbeebeebbebbebbbbbebebeebbeeb:
queryA 732:LSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELTTCVSDVT: 827
:********************* *****************************************************************:
7crf_B_1 710:LSEVSSLKHLDLSSNLLKTINXXXXXXXXXXKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELTTCVSDVT: 805
SecStr :SSS TT EEE TTS S ---------- EEE TT EE SSTTHHHHHHHHH SSB S GGG BEEESTTTTTSBTTS SSS S :
ExpBur :eeebebbebbbbbebebeebe----------ebeebbbbebebbbbeebbebbebbeeeeebbbeebbebebbbbeebeeebbeebeeeeeeeeee:
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[assembly_id:1]
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