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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [700 aa] | Toll-like receptor 3 :TLR3_MOUSE | |
2 | b | D 1 (D) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 329S(N) (identity: 0.0 %/36.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7c77_A_1 identity=36.4% |
queryA 65:VTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSN-------------GLNITDGAFLNLKNLRELLLEDNQLPQIPSGLPESLTEL: 151 : ***** * * * * ** * * ** * * * * ** ** * * * * * *: 7c77_A_1 126:LTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGLSSTKLGT-GVQLENLQELLLAKNKILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGCFQTIGKL: 224 SecStr : EEE S S TTSS TT EEE SS S-S TT EEE S EE SGGGTT SS EEEEEE TT EE TTHHHHSSEE: ExpBur :beebbbebbebeebebebbeebeebebbbbbebebeebebbe-eebbeebeebbbbebebeebeeebbebbeebebeebbbbebebeebbeebbeebeeb: queryA 152:-SLIQNNIY---NITKEGISRLIN--LKNLYLAWNCYFNKVCEKTNIEDGVFETL--TNLELLSLSFNSLSHVP----PKLPSSLRKLFLSNTQIKYISE: 239 : * ** * * * ** ** * * * *** * ** * * * ** *** * * * * : 7c77_A_1 225:FALLLNNAQLNPHLTEKLCWELSNTSIQNLSLANN-------QLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYLP-SLRYLSLEYNNIQRLSP: 316 SecStr :EEEE TT HHHHHHHHHHT SS EEE TT ------- EE TTTT GGGSS EEE S EE TTTTSS S-S EEE S B EE T: ExpBur :ebbebeebebeeebbbebbebbbebebeebbbbeb-------ebeebeeebbbbbeebebeebbbbebebeebbebbbbebe-ebeebbbeebbbeebee: queryA 240:EDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSS--------------------------TSLRKINAAWFKNMPH-: 312 : * ** ** * * * * *** * ** * * *** *** * * : 7c77_A_1 317:RSFYGLSNLRYLSLK----RAFTKQSVSL----ASHPNIDDFSFQWLKYLEYLNMDDNNIPSTKSNTFTGLVSLKYLSLSKTFTSLQTLTNETFVSLAHS: 408 SecStr :TTTTT SS EEE T----T B SSS---- EE SSTTSS SS EEE S B TTSSTT TT EEE TT BSS EE TTTSSTTTTS: ExpBur :ebbeebeebeebbbe----ebbbeeeeee----eeebebeeebbeebeebeebbbbebbbeebeeebbeebeebeebbbbebbeebeebeeebbebbeeb: queryA 313:-LKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKG------------------SYPQHINIS-RNFSKLLSLRALHLRGYVFQ--ELREDDFQPL: 390 : * * * * ** * * * * **** * * ** * * ** * ** * **: 7c77_A_1 409:PLLTLNLTKNH-ISKIANGTF-SWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFEIYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPL: 506 SecStr : EEE TTS - EE TTTT-SS SS EEE SS EEE SGGGTT SS EEE TT SEEE TTSSSS TT EEE SS S S SS TTSS : ExpBur :ebbebebbebe-beebeebbb-eebeebeebbbbebebebebebebbeebeebebbebbebeebbbeeebbeebeebeebbbeebebeebeeeebbbeeb: Contact : b b b queryA 391:MQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVK: 435 : ** * * * * * **** * * *: 7c77_A_1 507:R---NLTILDLSNNNIANINEDLLEGLENLEILDFQHNNLARLWK: 548 SecStr :T---T EEE S TTTT S TT EEE SS HHHHT: ExpBur :e---ebeebbbbebebeebeebbbeebeebebbbbbebebeebbe: |