[pdbjlvh2]Protein Model on 7b1b_D_1_J

Protein Model on 7b1b_D_1_J_1 (TEMPLATE: 7b1b )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	D 1 (B)	polymer(polypeptide(L)) [752 aa]	Toll-like receptor :A0A6I8TEX2_AEDAE
2	b		J 1 (J)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	745S(N) (identity: 0.0 %/30.7 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:7b1b_D_1 identity=30.7%

queryA       486:LDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTN: 585
                :* *  *    * *  *  *     * ** *     **   *        * *  *      *     *  *  *    *       *          *  :
7b1b_D_1     171:LGLVYNGLNEIQPGLFDGLESLEALSLSYN-DIKSLSAGSFNGLSSLRMLNLRVNKIESFDANTFASLKELSRLEITLNPFVSLPRGL---------FS-: 259
SecStr          :EE TTS      TTSSTT SS  B B  SB-   B  TTTT S SS  EEEESSB   B  HHHHHS TT  EEEEES    B  TTS---------ST-:    
ExpBur          :bbbbebbbeebeebbbebbeebeebbbbeb-ebeebeebbbebbeebeebbbeebebeebebebbeebebbeebbbbebebeebeebb---------be-:    

queryA       586:LKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQ: 685
                :                    * * *  *    **                  ** **   ** *     * *  *       **    * *      ** :
7b1b_D_1     260:--------------------ENKKLKTLILTNNRKLVTLPEE------LLANLKELTVVNLSHNGVGNLP-ESLLSGSSGIIELNLGYNRLNSLPEELLS: 332
SecStr          :--------------------T S   EEEEES SS  B  TT------TT S TT  EEE TT       -SSSSTT     EEE  S       STTST:    
ExpBur          :--------------------ebeebebbbbbebeebeebbee------bbbebeebeebebbebbbeeeb-ebbbebbebbeebbbbebebeebeeebbe:    

queryA       686:QFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTI: 751
                :  * *  * *  * *    *        * ** *****   *          ** * *  * * **:
7b1b_D_1     333:DQPQLQVLNLDHNQLESIPDYFLERNVELQTLYLSHNRLRSLSEKAFTKLKNLKELHLENNQLQTI: 398
SecStr          :T S   EEE  S       STTGGG S   EEE TT       GGGGTT       B TT      :    
ExpBur          :ebeebebbbbbebebeebeeebbeebebbebbebbebebeeeeeebbeebeebeebbbbbbbbeeb:    
Contact         :                                                           b

Protein Model on 7b1b_D_1_J_1 (TEMPLATE: 7b1b )

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