Protein Model on 6zjz_A_1_E_1
(TEMPLATE: 
6zjz
)Protein Model on 6zjz_A_1_E_1
(TEMPLATE: 6zjz
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [737 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | E 1 (E) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 476K 478Q 534Y 558V 560D 562S 588V 590N 612E 614V (identity: 100.0 %/93.8 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6zjz_A_1 identity=93.8% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:********************************************************************* *******************:
6zjz_A_1 5:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXNGLNITDGAFLNLKNLREL: 104
SecStr : SSSEEEEETTEEEEE SS SS S TT EEE SS EE TTSSTT TT EEE S ------------ EE TTSSTT TT EE:
ExpBur :ebeebbbeeeeeeeebbebeebebeebbeebbeebeebebbebebeebeeebbeebeebeebbbbebee------------eebebeebbbeebeebeeb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:****************************************************************************************************:
6zjz_A_1 105:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 204
SecStr :E SS SS SS TT SEEE SS EE HHHHTT TT SEEE SSBSSSSS EE TTTTTT TT EEE SB SS SS TT EEE T:
ExpBur :bbbebebeebbbebbeebeebbbbbbebeebbeebbbebeebebbbbbbbbeeeeebeebebeebbbeebeebebbbbbbbbbeebbeebbeebeebebb:
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
6zjz_A_1 205:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 304
SecStr :TS EE TTSSTT TT EEE TTSS SSS SS GGG EE TTTTSS TT EEE SS S GGGGTT TT EEE SS HHHHHS :
ExpBur :bbebeebeeeebeebeebbbbbbbbbbbbeebeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeeebbeebeebebbbbbbbebbebbeeb:
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
6zjz_A_1 305:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 404
SecStr :SGGGG TT EEE TT TT SB GGGGG TT EEE TT SEE TTTTGGGGG TT EEE S SEE GGGGGG SS EEE TTS :
ExpBur :ebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbbbbbbbbbeeebbebbbebeebbbbbbbbbebeebebebbeebeebebbbbbebeb:
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:**** **********************************************************************:
6zjz_A_1 405:SPLVXXXXXXXXXXXXXXXXXXXXXXXXXXFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 504
SecStr : -------------------------- TTS SSS S SS HHHHTTS EEE SSS SS TTTTTT SEEE SS B S TTTTST:
ExpBur :ebee--------------------------eebeeeebbeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebeeebbeebe:
Contact : b b
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:****************************************************************************************************:
6zjz_A_1 505:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 604
SecStr :T SEEE SS B STTTTTT TT EEE S SS S B GGGGG SS EEE TT B S S EESS EEE TTS HHHHHT TT T:
ExpBur :ebebbbbbebebbbeebebbebbeebbbbbbbebebeeeeeeeebbbebbeebeebeebebbebebebbeebebbebebbeebbbbbbbbbebbebeeee:
Contact : b b b b b b b b
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
6zjz_A_1 605:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 704
SecStr :TTTTTTEETT EEE TTS S HHHHHTS TT SEEE SS GGGGGG TT EEE SS TTHHHH SS EEE SS TT:
ExpBur :bbebbebbeebeebbbbebebeebeeebbebbbebbbebbbbebebeebebebbeebeebebbbbeebebeebbeebeebbebbeebbbbebebeebbee:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVS: 816
:* ****************** ********************************************************:
6zjz_A_1 705:FXXXVSSLKHLDLSSNLLKTINXXXXXXXXTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVS: 790
SecStr : --- TT EEE SS S -------- EEE TT EE STTHHHHHHHHHH TTSB GGGSBEEESTTTTTSBS :
ExpBur :e---eebbebbbbbebebeebe--------eeebeebbbbebebebeeebbebeeebeeeeebebbebbbbebeeeeebeeebbbe:
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[assembly_id:1]
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