Protein Model on 6wml_D_1_C_1
(TEMPLATE: 
6wml
)Protein Model on 6wml_D_1_C_1
(TEMPLATE: 6wml
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [708 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [681 aa] | Toll-like receptor 8 :TLR8_HUMAN | 182Y 183F 184N 185K 261F 262N 263A 264P 265F 266P 346F 348Y 403I 405F 427E 429R 460E 490L 491N 494F 514A 516S 518A 541R 543D 566H 567Y 569R 570I 571A 572G 573V 574T 598T 600T 601D 622I 625N 627D 628D 629N 630R 677K (identity: 100.0 %/90.4 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6wml_D_1 identity=90.4% |
queryA 33:SYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLL: 132
:******* ****************** *************** *********** ********************:
6wml_D_1 11:SYPCDEKXXXXXXIAECSNRRLQEVPQTVGKXXTELDLSDNFITHITNXXXXXXXXLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLRELLL: 110
SecStr : SSEE ------ EE TTS SS S -- EEE TTS EE -------- EEE TT ------------- EE TTTTTT TT EEE :
ExpBur :eebbeee------eeebeebebeeeeeeeee--ebeebbebebeeeee--------eebeebbebee-------------ebeeeeeeeeeeeebbbbbe:
queryA 133:EDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 232
:******************************* *******************************************************************:
6wml_D_1 111:EDNQLPQIPSGLPESLTELSLIQNNIYNITKXXISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNT: 210
SecStr : SS SS SS S SEEE TTS EE -- TT SEEE SSS TT EE TTTTTT TT EEE SS SS SS TT EEE TTS:
ExpBur :bbbebeebeeeebeebebebbbbbebeebee--ebebeebbebebbbbbbeeeeeeebeeeeebbbebeebbbbbbbbbbbeebbeebbebbeebebbbb:
Contact : bbbb
queryA 233:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 332
:****************************************************************************************************:
6wml_D_1 211:QIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAF: 310
SecStr : EE TTSSSS TT EEE TTSS TT SS TTT EE TTTTTT TT EEE TTS S GGGGTT TT EEE SS HHHHHS GG:
ExpBur :ebeebbeeebbebeebebbbbbbbbbbbeeeebebeebeeeeebebeeebbeebeebeebbbbbbbbeebbebbbeebeebebbbbbebebbebbeebeb:
Contact : bbbbbb
queryA 333:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 432
:****************************************************************************************************:
6wml_D_1 311:LTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISP: 410
SecStr :GGG TT EEE S TT SB GGGGG TT EEE TT SEE GGGGGGGTT SS EEE SS EE GGGGTS SS EEE SS :
ExpBur :beebeebeebbbbbbbeeeeeeeebebbeebeebebbebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebebbbbbebebee:
Contact : b b b b b b
queryA 433:LVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 532
:* **************************************************************************:
6wml_D_1 411:LXXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHV: 510
SecStr : ------------------------- S TTS SSS S SS HHHHTTS EEE SS S TTSSTT SEEE TTS S TTSSSTT :
ExpBur :e-------------------------eebeeeeebbeeeeeebeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebeeb:
Contact : b bb b b b b
queryA 533:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 632
:****************************************************************************************************:
6wml_D_1 511:KYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYI: 610
SecStr : EEE SS TTTTTT TT EEE S HHHHS TTS GGGGG SS EEE TTS SS BSS EEE TTS HHHHT TT TTT:
ExpBur :ebbbbbebebebeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebebeebbeeeebebebbeebbbbbbbbeebbeeeeeebb:
Contact : b b bb bbbbbb b bb b b bbbb
queryA 633:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFL: 732
:************************************************************************************************* :
6wml_D_1 611:SIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSXXX: 710
SecStr :TTTTTBTT EEE SS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT S EEE SS ---:
ExpBur :ebbeebeebeebbbbebebeebbeebbebbbebbeebbbbebebeebebebbeebeebeebbbeebebeeeeeebeebbebbbbbbbbebebeeeee---:
Contact : b
queryA 733:SEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIV: 815
: ********************* *********************** **************** *******:
6wml_D_1 711:XXVSSLKHLDLSSNLLKTINKSAXXXXXXXKLSMLELHGNPFECTCDIGDFRRXXXXXLNVKIPRLVDVICASPXXQRGKSIV: 793
SecStr :-- S EEE TTS TT ------- EEE TT EE STTHHHHH ----- SB S TTTSBEEES--STTSB :
ExpBur :--eeebbebbbbebebeeeeeee-------eeeeebbeebebbeeeebeeeee-----eeeeeebbbebbbeee--eeeebee:
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[assembly_id:2]
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