Protein Model on 6ty5_A_1_C_1
(TEMPLATE: 
6ty5
)Protein Model on 6ty5_A_1_C_1
(TEMPLATE: 6ty5
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [738 aa] | Toll-like receptor 8 :TLR8_HUMAN | |
| 2 | b | C 1 (C) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 226K 228F 230S 250L 252D 254S 291Y 293N 462D 464H 465S 466N 467F 468Y (identity: 100.0 %/93.7 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6ty5_A_1 identity=93.7% |
queryA 31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:********************************************************************* ******************:
6ty5_A_1 5:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNXXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 104
SecStr : SSEEEEETTEEEEE SS SS S S TTEEEEE TTS EE TTTTTT TT EEE SS ------------- EE TTSSTT TT EE:
ExpBur :ebeebbeeeeeeeebbbebeebebeebbeebbeebbebebbebebeebeeebbeebeebeebbbbebee-------------ebebeeebbeebeebebb:
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
:***************************************************** ********************************************:
6ty5_A_1 105:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFXXXCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 204
SecStr :E SS SS SS TT EEE TTS EE TTTTTT TT EEE SSS --- S EE TTSSTT TT EEE SS SS SS TT EEE T:
ExpBur :bbbebebeebbeebbebbeebbbbebebeebeeebbbebeebbebbbbebbbe---eeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:
Contact : b b b
queryA 231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
:****************************************************************************************************:
6ty5_A_1 205:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 304
SecStr :TS EE TTTTSS TT EEE TTSS SS SS TTS EE TTTTSS TT EEE SS S GGGGTT TT EEE SS HHHHHS :
ExpBur :bbebeebbeeebeebeebbbbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebebbbbeebeebebbbbbbbebbebbeeb:
Contact : b b b b b
queryA 331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
:****************************************************************************************************:
6ty5_A_1 305:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 404
SecStr :GGGGG TT EEE S TT SB GGGGG TT EEE TT SEE TTTTGGGTT SS EEE S SEE GGGGTT SS EEE SS :
ExpBur :ebbeebeebeebbbbbbeeeeeeeeebebbeebeebeebebbbbbbbbbbebeeebbebbbebeebebbbbbebebeebebebbeebeebeebbbbebeb:
queryA 431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
:*** *********************************************************************:
6ty5_A_1 405:SPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 504
SecStr : ---------------------------- TTS SSS S SS HHHHTTSEEEE SSS SS TTSSTT EEEEE SS B S TTSSST:
ExpBur :eee----------------------------eeeeeebbeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebbbebebebbeebe:
Contact : b bbbbb
queryA 531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
:********************************************************************** *********************** **:
6ty5_A_1 505:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTXKYNLESKSLVELVFSGNRLDILWXXXXNR: 604
SecStr :T SEEE SS B STTTTTT TT EEE TT SS TTTSS GGGGG SS EEE TT - S B SS EEE TTS HHHH ---- T:
ExpBur :ebebbbbbebebbbbeeebbbbbeebbbbbbbebebeeeeeeebbbbebbeebeebeebbbbebebeebb-eeebebebbeebbbbebbbeebe----ee:
queryA 631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
:****************************************************************************************************:
6ty5_A_1 605:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 704
SecStr :TTTTTTB TT EEE TTS S HHHHHTS TT SEEE SS S GGGGGG TT EEE SS S GGGT S EEE SS TT:
ExpBur :bbebbebbeebeebbbbebebeebeeebbeebbebbbebbbbebebeebebebbeebeebebbbbeebebeebbeebeeebebbeebbbbebebeebbee:
queryA 731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 818
:*** ************************************************************************************:
6ty5_A_1 705:FLSXVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLE: 792
SecStr :S - S EEE TTS HHHH SS EEE TT EE SGGGHHHHHHHHH TTSB GGG BEEE TTTTTSBTTS :
ExpBur :bbe-bebbebbbbbebebeebeeebbebeeebebeebbbbebebebeeebeebbebbeeeeebebeebbebebeeeeeeeeebbbebe:
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[assembly_id:1]
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