Protein Model on 6ka7_A_1_C_1 (TEMPLATE: 6ka7 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [246 aa] repebody
2 b C 1 (C) polymer(polypeptide(L)) [198 aa] Immunoglobulin gamma-1 heavy chain :IGG1_HUMAN 645D(E) 647S(K) 648L(W) 672N 716T(Y) 721H 742D(E) 766M(Y) (identity: 25.0 %/37.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6ka7_A_1 identity=37.4%
queryA       613:LVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTS: 712
                :*   ** *           **  * * *** * *  * *   **  *  *   * **  * * *        *  *                *   *   :
6ka7_A_1      62:LALGGNKL---------HDISALKELTNLTYLELKWNQLQILPNGVFDKL-TNLKELVLNSNQL--------QSLP----------------DGVFDKLT: 127
SecStr          :EE TTS  ---------S  GGGSS TT  EEE  SS   S  TTTTTT -TT SEEE TT   --------    ----------------TTTTTT T:    
ExpBur          :bbbbebeb---------eebebbbebeebebbbbeebbbeebeeebbebb-eebbebbbbbbeb--------eebe----------------eebbebbe:    
Contact         :                                b bb                       b                                        

queryA       713:SLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTT----------------------TKLSMLELHGNPFECT-CDIGDFRRWMDE: 789
                : *  * * **    ** *       *  * *  * *           *                       * *    ** **  **   *     *   :
6ka7_A_1     128:NLTYLNLAHNQLQSLPDGVFDKLTNLTGLELCGNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTXXXIRYLSEWINK: 227
SecStr          :T  EEE  SS  S   TTSTTS TT  EEE TTS      TTTTTT TT  EEE  SS      TTSSSS  S  EEE  SS B   ---  HHHHHHHH:    
ExpBur          :ebeebbbbebebeebbebbbebbeebebbbbbebebeebbebbbebbeebbbbebeebebeebeebbbeebeebeebbbbebebeee---bebbbebbee:    
Contact         :   b    b                    b                     b b                     b                        

queryA       790:HLNV: 793
                :*  *:
6ka7_A_1     228:HSGV: 231
SecStr          :TTTS:    
ExpBur          :eeeb:    


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