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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [773 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
2 | b | W 1 (B) | non-polymer(SO4) | SULFATE ION | 578E(N) 601D(S) 602K(R) 604N(T) (identity: 0.0 %/41.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:6if5_A_1 identity=41.3% |
queryA 30:FSRSYPCDEK--KQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNL: 127 :* *** ** * * * * * * * * * * ** * * * * * * * * *: 6if5_A_1 8:FPKTLPCDVTLDVSKNHVIVDCTDKHLTEIPGGIPTNTTNLTLTINHIPDISPASFHRLVHLVEIDFRCNCVPIRLGSKSNMCPRRLQIKPRSFSGLTYL: 107 SecStr :S SSEEEEETTTTEEEEE TTS SS TT TT SEEE S EE TTTTTT TT SEEE SS GGGS SSS SS EE TTSSTT TT : ExpBur :eeeebebeeeeeeeeeebebebeebebeebbeebeeebbbbbbbebebeebbeebbeebeebeebbbbbbbbbeebbeeeeeeeeebeeeeebbeebeeb: queryA 128:RELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRK: 226 : * * *** ** *** ** *** *** * ** * * *** *** * ** * ** * *** * ** *** * : 6if5_A_1 108:KSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKEQLTELANIEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTE: 207 SecStr : EEE SS SS TT EEE TTSS EE HHHHGGGTT EEE SSSBTTB SS EE TTTTTT TT EEE SS S SS TT SE: ExpBur :ebbebbbbbbeebbeebbeebebbbbbbbbbeebeeebbebbeebeebebbbbbbeebebeeebeeeeebbeebeebebbbbbbbebeebbeebbebbbe: queryA 227:LFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGE: 326 :* * * * * * ** * * ********** ****** ** * ** ** * * * * ** **** * *** * * *: 6if5_A_1 208:LYLYNNMIAEIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCTPCKNNSPLQIPVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAKE: 307 SecStr :EE SS B TTTTTT TT EEE SSS TT SS GGG B TTTTTT TT EEE SS S GGGGTT EEE SSS HHH: ExpBur :bbbbbbebeebeeebbeebeebebbbbbbbbbbeeeeebebeeeeeeeebebeeebbeebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbeb: queryA 327:IASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLS: 426 :* ** ** * ****** * * * ** * ** * ***** ** ** * ** ** **** * * * * **: 6if5_A_1 308:IGDAKFLHFLPNLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLS: 407 SecStr :HTT GGGGG TT EEE S TT BSS GGGGG TT EEE S BSEE GGGGGGGTT TT EEE SS EE GGGGGGGTT SEEE : ExpBur :beebebbeebeebeebbbbbbbeeeeeeeebebbebbeebeebebbbbbbbbbeebeeebbebbbebeebebbbbbbbebeebebbbbeebeebebbbbb: queryA 427:ENRISPLVKDTRQSYANSSSFQRHIRKRRSTD----FEFDPHSN-----FYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSN: 517 : * *** * * * ** **** ****** * * ***** * : 6if5_A_1 408:VNKISPXXXXXXXXXXXXXXXXXXXXXXXVLEQLYYFRYDKYARSCRXXXXXXXXXXXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLI: 507 SecStr :SS ----------------------- TTTTT S TT ------------- GGGS EEE SS GGGGTT TT SEEE TTS : ExpBur :ebebee-----------------------eeeeeebeebbeeeeebe-------------ebeebeebbbbbebebeebeeeebeebebbbbbbbbebeb: queryA 518:AQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSG: 617 : * * * ** *** ***** * ** ***** * ***** * ** * * * * * * * * ** ** * * *: 6if5_A_1 508:SQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR-TMESESLRTLEFRG: 606 SecStr : S SSTT TT EEE SS TTTTTT TT EEE TT GGGGSTT GGGGGG TT EEE TT SSS- EESS EEE S: ExpBur :ebebebebbeebeebebbbbbebebbbeeeebbebbeebebbbbbebeeebeeeeeebebebbeebeebeebbbbebebeebebe-ebebebbebbbbee: Contact : b bb b queryA 618:NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTL: 717 :* ** ** * **** ** * * ** * * * * * * * * * ** * * * ** *** * * ** ** *: 6if5_A_1 607:NHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNL: 706 SecStr :S HHHHT TT TTTTTTTEETT EEE SS SS TTTTTTS TT EEE SS GGGGGG TT EEE SS S GGGT SS EE: ExpBur :bebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebeebeebeebebbebbebebeebbeebbebbeebeeb: queryA 718:LLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLV-DVICASPGDQRGKSIVS: 816 : * * * * ** * ****** * * * ** ** * * **** * * * * ** * ** * ** * * *: 6if5_A_1 707:ILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAVWFVWWV-QHTEVTIPYLATDVTCVGPGAHKGQSVIS: 805 SecStr :E SS TTTTTT TT EEE SS GGGS HHHHTT SEEE SS EE SGGGHHHHHHH-HH S TTTTTS BEEESGGGTT BGGG: ExpBur :bbeebebeebbeebbeebeebeebbbbebebeebeeebbeeebbeebeebbbbebebebeeebebbbebb-bbbebebeeebeebebebeeeeeeeebbe: queryA 817:LELTTC: 822 :* * **: 6if5_A_1 806:LDLYTC: 811 SecStr : GGG: ExpBur :bebeee: |