Protein Model on 6gff_J_1_E_1 (TEMPLATE: 6gff )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:2]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) J 1 (J) polymer(polypeptide(L)) [493 aa] Leucine-rich repeat-containing protein 32 :LRC32_HUMAN
2 b E 1 (E) polymer(polypeptide(L)) [222 aa] Transforming growth factor beta-1 :TGFB1_HUMAN 518A(M) 519Q(D) 520V(I) 521L(E) 522S(D) 526F 535L 537L 542L 543D 544F 545D(S) 553L 636K(E) 637G (identity: 53.3 %/31.5 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:6gff_J_1 identity=31.5%
queryA       381:ELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCA: 480
                : **     **     *    *  * *       **    **   *  **            *   *        * *       *        *      :
6gff_J_1      41:QLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLEHLSLAHNRLA---------MATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEAPS: 131
SecStr          :   EE HHHHTT TT SEEE  SS   EE TTTGGG TT  EEE  SS GG---------GHHHHSTT S   SS  EEE TTS  BTTHHHHH    TT:    
ExpBur          :ebeebeeeebeebeebbebbbbebebeebeeebbeebeebeebbbbebebb---------ebbeebeebbbebeebebbebbebebeeeebeebbeebee:    

queryA       481:AYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRL----DFDNASALTELSDLEVLDLSYNS-HYFRIAGVTH: 575
                :     * *  **        *   *    * *  *       *  *   *    * *  * *    **        *  * ***** **   *  *    :
6gff_J_1     132:LH--TLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLMDIEDGA-FEGLPRLTHLNLSRNSLTCISDFS-------LQQLRVLDLSCNSIEAFQTASQPQ: 221
SecStr          :  --EEE  SSB  EE TTSS S TT  EEE  SS   EE TTT-TTT TT  EEE  S    EE    ------- SS  EEE  SS   EE   SS S:    
ExpBur          :be--ebbbbebebbebeeebbeebeebeebebebbebeeeeebb-beebeebeebebbebebebbeebe-------beebbebbbbebebbbbebeeeee:    
Contact         :                                     bbbbb   b        b b    b bbbbbb       b                       

queryA       576:HLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGN--RLDILWNDDDNRYISIFKG-----------------LKNLTRLDLSLNRLKHIPN: 656
                :  **      *  * *  *      *   *    *  *  * *  **                *                    *  **** *    ** :
6gff_J_1     222:A-EF-----QLTWLDLRENKLLHFPDLAAL--PRLIYLNLSNNLIRLPXXXXXXXXXIHAPSEGWSALXXXXXXXXXXXXXXXQLLNLDLSYNEIELIP-: 312
SecStr          :S-  -----   EEE  SS   S   GGG --TT  EEE  SS     --------- EETTTTEE  ---------------   EEE  SS      -:    
ExpBur          :e-eb-----ebeebbbeebebeeebebebb--eebeebbbbebebebe---------eebeeeeeeee---------------ebeebbbbebebeebe-:    
Contact         :                                                              bbbb                                  

queryA       657:EAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSN: 746
                :  **    **  *    * *  *    *   * * ****  * *  *         *******  *    **        **  * *  *:
6gff_J_1     313:DSFLEHLTSLCFLNLSRNCLRTFEARRLGSLPCLMLLDLSHNALETLELG-ARALGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGN: 401
SecStr          :HHHHHH TT  EEE  SS   EEEE STT S S  EEE  SS   EEEE -TTTSTT  EEE TT       TTTGGG TT  EEE TTS:    
ExpBur          :eebbeebeebeebebbebebeebebeeeebbeebbebbbbebebeebebe-eebbeebbebbbbebebeebeeebbeebeebbebbbeeb:

Input Residue Numbers for Focused Sites

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