Protein Model on 6gff_I_1_O_1
(TEMPLATE: 
6gff
)Protein Model on 6gff_I_1_O_1
(TEMPLATE: 6gff
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | I 1 (I) | polymer(polypeptide(L)) [551 aa] | Leucine-rich repeat-containing protein 32 :LRC32_HUMAN | |
| 2 | b | O 1 (O) | branched(oligosaccharide) | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 319E(H) 358N 371A(V) 373H(D) 398T(W) 402G(R) (identity: 16.7 %/33.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:6gff_I_1 identity=33.0% |
queryA 139:QIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYIS: 238
:* ** ** * * * * * * * * * * * ** ** *** * * *:
6gff_I_1 23:QVPSVLPPDTETLDLSGNQLRSILASPLGFYTALRHLDLSTN-------EISFLQPGAFQALTHLEHLSLAHNRLAMA------------------TALS: 97
SecStr :S SSS TT EEE TTS EE HHHHTT TT SEEE SS------- EE TTTGGG TT EEE SS GGGH------------------HHHS:
ExpBur :ebbeebeeebebbbbbebebeebeeeebeebeebeebbbbeb-------ebbebeeebbeebeebebbbbbebebbeb------------------beeb:
queryA 239:EEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPR: 338
: * * ****** * * * * * ** * ** * *** * * * *** ***:
6gff_I_1 98:AGGLGPLPRVTSLDLSGNSLY---------------SGLLERL-LGEAPSLHTLSLAENSLTRLTRHTFRDMPALEQLDLHSNVLM-DIEDGAF-EGLPR: 179
SecStr :TT S SS EEE TTS B---------------TTHHHHH- TT EEE SSB EE TTSS S TT EEE SS -EE TTTT-TT TT:
ExpBur :eebbbebeebeebebbebebe---------------eeebeeb-beebeebeebbbbebebeebeeebbeebeebeebebeebebe-eeeebbb-eebee:
Contact : b
queryA 339:LEILDLSFNYIKGSYPQHINISRNFSKLLS------LRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS-: 431
:* * * *** * ** * * ** * * * * * * ** * * :
6gff_I_1 180:L---------------THLNLSRNSLTCISDFSLQQLRVLDLSCNSIEAFQTAS-QPQAEF-QLTWLDLREN--KLLHFPDLAALPRLIYLNLSNNLIRL: 260
SecStr : --------------- EEE SS EE SS EEE SS EE S-S SS - EEE TTS-- S GGG TT EEE SS :
ExpBur :b---------------bebebbebebebbeebebeebeebbbbebebbbbebee-eeeeeb-bbeebbbeeb--ebebbbebebbebbeebbbbebebee:
Contact : b b b b b
queryA 432:PLVKDTRQS--YANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAI: 529
:* * * * * **** * * * * * **** * :
6gff_I_1 261:PXXXXXXXXXIHAPSEGWSAXXXXXXXXXXXXRPLSQLLN----------------LDLSYNEIELIPDSFLEHLTSLCFLNLSRNC-LRTFEARRLGSL: 343
SecStr :---------- EETTTTEE ------------ TTTT E----------------EE SS HHHHHH TT EEE SS - EEEE STT S:
ExpBur :----------eebeeeeeee------------eebeebee----------------bbbbebebeebeeebbebbeebeebebbebe-beebebeeeebb:
queryA 530:PHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDN: 629
:* *** * * * * * * * * * * ** * *** * :
6gff_I_1 344:PCLMLLDLSHNAL--------------ETLELGARA-----------------LGSLRTLLLQGNALRDLPPYTFANLASLQRLNLQGNRVSPCGGPDEP: 412
SecStr :TT EEE SS -------------- EEEE TTT-----------------STT EEE TT TTTTTT TT EEE TTS B TTSS :
ExpBur :eebbebbbbebeb--------------eebebeeeb-----------------beebeebbbbebebeebeeebbeebeebeebbbeebebebbbeeeee:
queryA 630:--RYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDN-MLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISH: 726
: * * * * * * *** * **** * * * ** * * ** * * * * * * * ** **:
6gff_I_1 413:GPSGCVAFSGITSLRSLSLVDNEIELLRAGAFLHTP--LTELDLSSNPGLEVATGALGGLEASLEVLALQGNGLMVLQVDLPCFIC-LKRLNLAENRLSH: 509
SecStr : SSS B SS SS EEE TTS EE TTTTTT -- SEEE S TT EE TTSS S TTT EEE TTS SS S GGG TT- EEE SS :
ExpBur :eeeebbbbbebeebebbbbbebebeebeebbbeebe--beebebbebeebebbeebbeebeebbeebbbeebebeebebebeebee-bebbebbbbebee:
queryA 727:LPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLN: 792
:** ** *** * ** * * * * *** * * * * * :
6gff_I_1 510:LPA--WTQAVSLEVLDLRNNSFSLLPGSAM-GGLETSLRRLYLQGNPLSC-CGNG----WLAAQLH: 567
SecStr : -- S EEE SS TTTT-STTTTT EEE SS T-TTS ----HHHHHTS:
ExpBur :bee--beeebebeebbbeebebeebeeebb-ebbeebbebbebeebeeee-eeee----bbeebee:
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[assembly_id:1]
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