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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [775 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
2 | b | Y 1 (A) | non-polymer(IDQ) | 1-[[4-(aminomethyl)phenyl]methyl]-2-butyl-imidazo[4,5-c]quinolin-4-amine | 262N 346F 348Y(F) 351G(Q) 352S(V) 353Y 378V 405F (identity: 62.5 %/41.5 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5zsa_A_1 identity=41.5% |
queryA 30:FSRSYPCDEK--KQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNL: 127 :* *** ** * * * * * * * * * * ** * * * * * * * * *: 5zsa_A_1 8:FPKTLPCDVTLDVSKNHVIVDCTDKHLTEIPGGIPTNTTNLTLTINHIPDISPASFHRLVHLVEIDFRCNCVPIRLGSKSNMCPRRLQIKPRSFSGLTYL: 107 SecStr :S SSEEEEETTTTEEEEE TT SS TT TT EEE SS EE TTTTTT TT EEE SS TTTS SSS SS EE TTTTTT TT : ExpBur :eeeebebeeeeeeeeeebebebbebebeebbeebeeebbbbbbbebebeebeeebbeebeebebbbbbbbbebeeebeeeeeeeeebeeeeebbeebeeb: queryA 128:RELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRK: 226 : * * *** ** *** ** *** *** * ** * * *** *** * ** * ** * *** * ** *** * : 5zsa_A_1 108:KSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKEQLTELANIEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTE: 207 SecStr : EEE SS S TT EEE TTSS EE GGGGGGGTT EEE SSSBTTB SS EE TTTTTT TT EEE SS S S TT SE: ExpBur :ebbbbbbbbbeebbeebbeebebbbbbbbbbeebeeebbebbeebeebebbbbbbeebebeeebeeeeebbeebeebebbbbbbbebeebbeebbeebbe: queryA 227:LFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGE: 326 :* * * * * * ** * * ********** ****** ** * ** ** * * * * ** **** * *** * * *: 5zsa_A_1 208:LYLYNNMIAEIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCTPCKNNSPLQIPVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAKE: 307 SecStr :EE SS B TTTTTT TT EEE TTSS TT SS GGG B TTTTTT TT EEE TTS S GGGGSS EEE SSS HHH: ExpBur :bbbbbbebeebeeebbeebeebebbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbeb: Contact : b queryA 327:IASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLS: 426 :* ** ** * ****** * * * ** * ** * ***** ** ** * ** ** **** * * * * **: 5zsa_A_1 308:IGDAKFLHFLPNLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLS: 407 SecStr :HTT GGGGG TT EEE S TT BSS GGGGG TT EEE S BSEE GGGGGGGTT TT EEE SS EE GGGGGGGTT SEEE : ExpBur :beebebbeebeebeebbbbbbbeeeeeeeebebbebbebbeebebbbbbbbbbeebeeebbebbbebeebebbbbbebebeebebbbbeebeebebbbbb: Contact : b b bbb b b queryA 427:ENRISPLVKDTRQSYANSSSFQRHIRKRRSTD----FEFDPHSNFYHF-----TRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSN: 517 : * *** * * * * ** **** ****** * * ***** * : 5zsa_A_1 408:VNKISPXXXXXXXXXXXXXXXXXXXXXXXVLEQLYYFRYDKYARSCRFKXXXXXXXXXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLI: 507 SecStr :SS ----------------------- SS TT S TT SS ----------- GGGS EEE SS GGGGTT TT SEEE TT : ExpBur :ebebee-----------------------eebeeebbebbeeeeeeeee-----------ebeeeebbbbbbebebeebeeeebeebebbbbbbbbebeb: queryA 518:AQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSG: 617 : * * * ** *** ***** * ** ***** * ***** * ** * * * * * * * * ** ** * * *: 5zsa_A_1 508:SQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR-TMESESLRTLEFRG: 606 SecStr : S TTTT TT EEE SS TT TTTTTT TT EEE S GGGSSTT TTGGGG TT EEE TT SSS- EESS EEE S: ExpBur :ebebebebbebbeebebbbbbebebbbeeeebbebbeebebbbbbebeeebeeeeeebbbebbeebeebeebbbbebebeebebe-ebebebbebbbbeb: queryA 618:NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTL: 717 :* ** ** * **** ** * * ** * * * * * * * * * ** * * * ** *** * * ** ** *: 5zsa_A_1 607:NHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNL: 706 SecStr :S HHHHT TT TTTTTTTEETT EEE SS SS TTTTTTS TT EEE SS GGGGGG TT EEE SS S GGGT SS EE: ExpBur :bebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebeebeebeebebbebbebebeebbeebbebbebbeeb: queryA 718:LLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLV-DVICASPGDQRGKSIVS: 816 : * * * * ** * ****** * * * ** ** * * **** * * * * ** * ** * ** * * *: 5zsa_A_1 707:ILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAVWFVWWV-QHTEVTIPYLATDVTCVGPGAHKGQSVIS: 805 SecStr :E SS TTTTTT TT EEE SS TTTS HHHHTT SEEE SS EE SGGGHHHHHHH-HH S TTTTTT BEEESGGGTT BSTT: ExpBur :bbeebebeebbeebbeebeebeebbbbebbbeebeeebbeeebbeebeebbbbebebebeeebebbbebb-bbbebebeeeeeebebebeeeeeeebbbe: queryA 817:LELTTC: 822 :* * **: 5zsa_A_1 806:LDLYTC: 811 SecStr : GGG: ExpBur :bebeee: |