Protein Model on 5uf4_A_1_D_1
(TEMPLATE: 
5uf4
)Protein Model on 5uf4_A_1_D_1
(TEMPLATE: 5uf4
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [241 aa] | O13 | |
| 2 | b | D 1 (D) | branched(oligosaccharide) | beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-alpha-D-glucopyranose | 131L(W) 133E(N) 134D(N) 176Y 207S(L) 209S(C) 228F(A) 230S(D) 231N(Q) 252D(Y) 254S(F) (identity: 9.1 %/35.1 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5uf4_A_1 identity=35.1% |
queryA 119:GAFLNLKNLRELLLEDNQLPQIPSGLPESLTELSLI---QNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSH: 215
:* * * ** * * *** * ** *** * * ** * *** * ** * * * * * :
5uf4_A_1 54:GVFDRLVNLQTLWLNNNQLTSLPAGLFDSLTQLTILALDSNQLQALPVGVFGRLVDLQQLYLGSN-------QLSALPSAVFDRLVHLKELLMCCNKLTE: 146
SecStr :TTTTT TT SEEE SS TTTTTT TT EEE SS TTTTTT TT EEE SS------- S TTTTTT TT EEE SS S:
ExpBur :eebeebeebebbebbebebeebeeebbeebeebbbbbbeebebeebeeebbeebeebebbebbeb-------ebeebbeebbeebeebebbbbbebebee:
Contact : b bb b b b b b
queryA 216:VPPKLP--SSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGN: 256
: * * * * * * * * * ** * **:
5uf4_A_1 147:LPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN: 189
SecStr : TTGGG TT SEEE SS TTTTTT TT EEE S :
ExpBur :bbebbeebeebebbbbbebebeebeeebbeebeebeebbbbeb:
Contact : b bb b b
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[assembly_id:1]
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