[pdbjlvh2]Protein Model on 5gs2_D_1_B

Protein Model on 5gs2_D_1_B_1 (TEMPLATE: 5gs2 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	D 1 (B)	polymer(polypeptide(L)) [268 aa]	repebody
2	b		B 1 (D)	polymer(polypeptide(L)) [226 aa]	anti-repebody	726H(S) 747L(Q) 749K(Q) 750T(S) 753K(E) 771G(N) 772N 773P 774F(W) 775E(D) 777T(A) 779D (identity: 25.0 %/30.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:5gs2_D_1 identity=30.9%

queryA       594:NNIYTLTDKYNLESKSLVELVFSG--NRLD-ILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRL: 690
                :      * * **  **    *     *  * *  *  *         * *   * *  * *  *     *     ** *    * *             *:
5gs2_D_1      15:DDAFAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI---SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL: 111
SecStr          : HHHHHHHHHHTT S SS EE HHHHTT  EEE TTS  S  TTGGG TT SEEEEES      ---GGGTT TT  EEEEES       TTSSTT TT :    
ExpBur          :beebbebbeeebebeebeeebeeeebeebeebebeeeebeebebbeebeebeebbbbebebeeb---ebbeebeebbebbbeebebeebeeebbeebeeb:    

queryA       691:ELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTT----------------------TKLSMLE: 768
                :  * *  * *  * *   *    *  * * **    ** *       *  ***  * *           *                       * *    :
5gs2_D_1     112:KELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIW: 211
SecStr          :SEEEEESS      TTGGGG TT  EEE TT    S  TTTTTT TT  EEE TTS      TTTTTT S   EEE  SS  S   TTSSTT TT  EEE:    
ExpBur          :ebbbbbebebeebbeebbeebeebbebbbeebebeebbebbbeebeebbebbbbebebeebbebbbeebeebebbbbbebebebbbebbbeebeebeebb:    
Contact         :                                   b                    b bb  b                 b b                 

queryA       769:LHGNPFECTC-DIGDFRRWMDEH: 790
                :*  **  * * **    **   *:
5gs2_D_1     212:LLNNPWDCACSDILYLSRWISQH: 234
SecStr          :  S  B TTSGGGHHHHHHHHH :    
ExpBur          :bbebebebebeebebbbebbeee:    
Contact         :  bbbbb b  b

Protein Model on 5gs2_D_1_B_1 (TEMPLATE: 5gs2 )

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