Protein Model on 5gmf_A_1_C_1
(TEMPLATE: 
5gmf
)Protein Model on 5gmf_A_1_C_1
(TEMPLATE: 5gmf
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [776 aa] | Toll-like receptor 7 :B3Y653_MACMU | |
| 2 | b | C 1 (C) | polymer(polypeptide(L)) [776 aa] | Toll-like receptor 7 :B3Y653_MACMU | 102H(R) 106N(K) 107P(S) 183F(Y) 184N(R) 261F(Y) 262N 263A 264P 265F 266P 403I(T) 405F 427E(V) 429R(K) 459F 490L(K) 491N 492S 494F 514A(G) 515N 516S(L) 518A(S) 520V(T) 541R 543D 566H 567Y 570I(S) 571A(E) 572G 573V(I) 574T 600T 625N(R) 626D 627D(G) 628D 630R 653H(F) 677K 678F(S) (identity: 51.2 %/41.5 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:5gmf_A_1 identity=41.5% |
queryA 30:FSRSYPCDEK--KQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNL: 127
:* *** ** * * * * * * * * * * ** * * * * * * * * *:
5gmf_A_1 8:FPKTLPCDVTLDVSKNHVIVDCTDKHLTEIPGGIPTNTTNLTLTINHIPDISPASFHRLVHLVEIDFRCNCVPIRLGSKSNMCPRRLQIKPRSFSGLTYL: 107
SecStr :S TT SSEEEEETTTTEEEEE TTS SS TT TT EEE S EE TTTTSS TT SEEE SS TTTS SSS S EE TTSSTT TT :
ExpBur :eeeebebeeeeeeeeebbebebbeeebeebbeebbeebbbbbbbebebeebbeebbeebeebbbbbbbbbbbbeeebeeeeebeeebeeeeebbeebeeb:
Contact : b bb
queryA 128:RELLLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRK: 226
: * * *** ** *** ** *** *** * ** * * *** *** * ** * ** * *** * ** *** * :
5gmf_A_1 108:KSLYLDGNQLLEIPQGLPPSLQLLSLEANNIFSIRKEQLTELANIEILYLGQNCYYRNPCYVSYSIEKDAFLNLTKLKVLSLKDNNVTTVPTVLPSTLTE: 207
SecStr : EEE SS SS S TT EEE TTSS EE GGGGTT TT EEE SSSBTTB SS EE TTTTTT TT EEE SS S SS TT SE:
ExpBur :ebbbbbbbbbeebbeebbeebebbbbbbbbbeebeeebbeebeebeebebbbbbbeebebeeebeeeeebbeebeebebbbbbbbebeebbeebbebbbe:
Contact : bb
queryA 227:LFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGE: 326
:* * * * * * ** * * ********** ****** ** * ** ** * * * * ** **** * *** * * *:
5gmf_A_1 208:LYLYNNMIAEIQEDDFNNLNQLQILDLSGNCPRCYNAPFPCTPCKNNSPLQIPVNAFDALTELKVLRLHSNSLQHVPPRWFKNINNLQELDLSQNFLAKE: 307
SecStr :EE SS B TTTTTT TT EEE TTSS TT SS GGG B TTTTTT TT EEE TTS S GGGGTT EEE SSS HHH:
ExpBur :bbbbbbebeebeeebbeebeebebbbbbbbbbbeeeeebeeeeeeeeeebebeeebbeebeebebbbbbbbbbeebeeebbeebeebeebbbbbbebbeb:
Contact : bbbbbb
queryA 327:IASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLS: 426
:* ** ** * ****** * * * ** * ** * ***** ** ** * ** ** **** * * * * **:
5gmf_A_1 308:IGDAKFLHFLPNLIQLDLSFNFELQVYRASMNLSQAFSSLKSLKILRIRGYVFKELKSFQLSPLHNLQNLEVLDLGTNFIKIANLSMFKQFKRLKVIDLS: 407
SecStr :HHH GGGGG TT EEE S TT EEE GGGGG TT EEE TT EEEE GGGGGGGTT TT EEE SS EE GGGGGGGTT SEEE :
ExpBur :beebebbeebeebeebbbbbbbeeeeebebbebbebbeebeebeebbbbbbbbeebeeebbebbbebeebebbbbbbbebeebebbbbeebeebebbbbb:
Contact : b b
queryA 427:ENRISPLVKDTRQSYANSSSFQRHIRKRRSTD----FEFDPHSNFYHF-----TRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSN: 517
: * *** * * * * ** **** ****** * * ***** * :
5gmf_A_1 408:VNKISPXXXXXXXXXXXXXXXXXXXXXXXVLEQLYYFRYDKYARSCRFKXXXXXXXXXXXSCYKYGQTLDLSKNSIFFIKSSDFQHLSFLKCLNLSGNLI: 507
SecStr :S ----------------------- SS SS S TT SS ----------- GGGS EEE SS GGGGTT TT SEEE TTS :
ExpBur :ebebee-----------------------eeeeebbeeebbeeeeeeee-----------ebeeeeebbbbbebebeebebeebeebebbbbbbbbebeb:
Contact :b b bbbbb bbb b bbb
queryA 518:AQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSG: 617
: * * * ** *** ***** * ** ***** * ***** * ** * * * * * * * * ** ** * * *:
5gmf_A_1 508:SQTLNGSEFQPLAELRYLDFSNNRLDLLHSTAFEELRKLEVLDISSNSHYFQSEGITHMLNFTKNLKVLQKLMMNDNDISSSTSR-TMESESLRTLEFRG: 606
SecStr : S SSTT TT EEE SS TTTTTT TT EEE TT GGGGSTT GGGGGG TT EEE TT SSS- EESS EEE TT:
ExpBur :ebebebebbebbeebebbbbbebebbbeeeebbebbeebebbbbbebeeebeeeeeebbbebbeebeebeebbbbebebeebebe-ebebebbebbbbeb:
Contact :b b b b bb bbbbb b
queryA 618:NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTL: 717
:* ** ** * **** ** * * ** * * * * * * * * * ** * * * ** *** * * ** ** *:
5gmf_A_1 607:NHLDVLWRDGDNRYLQLFKNLLKLEELDISKNSLSFLPSGVFDGMPPNLKNLSLAKNGLKSFIWEKLRYLKNLETLDLSHNQLTTVPERLSNCSRSLKNL: 706
SecStr :S HHHHT TT TTTTTTTEETT EEE SS S TTTTTTS TT EEE SS GGGGGG TT EEE SS S GGGT SS EE:
ExpBur :bebeebbeeeeeebbebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebeebeebeebebbebbebebeebbeebbebbeebeeb:
Contact : bbbb b b bb
queryA 718:LLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLV-DVICASPGDQRGKSIVS: 816
: * * * * ** * ****** * * * ** ** * * **** * * * * ** * ** * ** * * *:
5gmf_A_1 707:ILKNNQIRSLTKYFLQDAFQLRYLDLSSNKIQMIQKTSFPENVLNNLKMLLLHHNRFLCTCDAVWFVWWV-QHTEVTIPYLATDVTCVGPGAHKGQSVIS: 805
SecStr :E SS TTTTTT TT EEE TTS TTTS HHHHTT SEEE S EE SGGGHHHHHHH-HH S TTHHHH BEEESGGGTT BGGG:
ExpBur :bbeebebeebbeebbeebeebeebbbbebbbeebeeebbbeebbeebeebbbbebebebeeebebbbebb-eebebebeebeeebebebeeeeeeeebbe:
queryA 817:LELTTC: 822
:* * **:
5gmf_A_1 806:LDLYTC: 811
SecStr : TT :
ExpBur :bebeee:
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[assembly_id:1]
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