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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (B) | polymer(polypeptide(L)) [603 aa] | Leucine-rich repeat receptor-like protein kinase TDR :TDR_ARATH | |
2 | b | E 1 (E) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 180N 202N (identity: 100.0 %/33.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:5gij_A_1 identity=33.6% |
queryA 120:AFLNLKNLRELLLEDNQLP-QIPSGLP--ESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETL--TNLELLSLSFNSLS: 214 : *** * * *** **** ** **** ** *** * * * * ** * * * ** * ** : 5gij_A_1 262:SYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTWLSLISNNLSGEVPEGIGELPELTTLFL-WNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLC: 360 SecStr :GGGG TT EEE SS S GGGGG TT EEE TTS SB GGGGG SS EEE -TTS BS TTGGGGS EEE SS EE TTTT: ExpBur :ebbebebbeebbbbebebebebbeebeebeebeebbbbebebebebbebbbebeebbbbbb-eebebebebbebbbeebebebbbbbebebebebbeebb: Contact : b b queryA 215:H-------------VPPKLPSSLRKL-----FLS-NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLS: 295 :* ** ** * * * * * *** *** * * * * * * *****: 5gij_A_1 361:HGNKLYKLILFSNMFEGELPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDLSNN--RFTDQ----IPAD-----------FATAPVLQYLNLS: 443 SecStr :TTS EEE SSEEEEE GGGGG TT EEE SSEEES S GGG TT EEE SS-- S ---- GG-----------GGG SS EEE : ExpBur :eeeebeebbbbebebeeebbebbbebebbeebebbebebebebbeebbebeebbbbbbbeb--ebeee----bbeb-----------bbebeebebbbbb: queryA 296:STSL-RKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRAL--HLRGYVFQELREDDFQPLMQ: 392 : ** * * * * * *** * * * * * * * ***** ** * * : 5gij_A_1 444:TNFFHRKLPENIWK-APNLQIFSASFSNLIGEIPNYVGCKSFYRIE---LQGNSLNGTIPWDIG---HCEKLLSLNLSQNHLNGIIPWEIS--------T: 528 SecStr :S B TTGGG- SS EEE TTS B S S S EEE--- SS S GGGG---G TT EEE SS EE GGGG--------G: ExpBur :ebebeeebbeebbe-beebebbbbbebebeeebbebeebebbeebe---bbebebebebbeebe---ebeebebbebbebebebebbebbb--------e: queryA 393:LPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRH: 450 :** * * * * * * * * : 5gij_A_1 529:LPSIADVDLSHNLLTGTIPSDFGSSKTITTFNVSYNQLIGPIPSGSFAHLNPSFFSSN: 586 SecStr : SS EEE SSEE SB GGGGG TT EEE TTS EEE SGGGGS GGGGTT : ExpBur :beebeebebbebebeebbbeebbebeebeebbbbebebebebbeeebeebeeebbeeb: |