Protein Model on 5b4p_A_1_B_1 (TEMPLATE: 5b4p )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [254 aa] repebody
2 b B 1 (B) polymer(polypeptide(L)) [72 aa] C5a anaphylatoxin :CO5_HUMAN 617G 618N 643R(Y) 645D(F) 646L 647S(D) 648L(F) 649N 670H(Y) 671I(L) 673D(P) 694D(G) 696R(D) 697G(M) 721H(Y) (identity: 26.7 %/35.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:5b4p_A_1 identity=35.7%
queryA       613:LVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTS: 712
                :*   ** *           **  * * *** * *  * *   **  *  *   * **    * *             *  * *  * *  *     *   :
5b4p_A_1      70:LALGGNKL---------HDISALKELTNLTYLFLDFNQLQ-LPNGVFDKL-TNLKELYLSPNQLQSLPDGVFDKLTNLTILGLDMNQLQSLPKGVFDKLT: 158
SecStr          :EEEEEEEE---------  GGGGTT SS  EEEEEEEEE -  TTGGGG -TT  EEE   BTTSS  TTTTTT SS  EEE TTS      TTSSTT T:    
ExpBur          :bbbbbebb---------eebebbeebeebeebebebeebe-beeebbeeb-eebeebbbbbbeeebbeeebbeebeebebbbbeebebeebbeebbeebe:    
Contact         :    bb                        b bbbbb                    bb b                    b bb               

queryA       713:SLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTC-DIGDFRRWMDEHLNV: 793
                : *  * ** *    ** *       ** * ** * **          *   *    ** **  ***  *     *   *  *:
5b4p_A_1     159:NLTELDLSYNQLQSLPKGVFDKLTQLKDLSLSYNQLKSVPDGVFDRLTS--LQYIWLHDNPWDCTCPGIRYLSEWINKHSGV: 238
SecStr          :T  EEE  SS      TTSSTT SS  EEE  SS  S   TTTTTT TT--   EE  S  B   TTTTHHHHHHHHT   B:    
ExpBur          :ebeebebbebebeebbeebbeebeebebbbbbebebbebbebbbebbee--beebebeebebeeeeeeebebbebbeeeebb:    
Contact         :        b                                                                                           


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