[pdbjlvh2]Protein Model on 4u7l_A_1_G

Protein Model on 4u7l_A_1_G_1 (TEMPLATE: 4u7l )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [455 aa]	Leucine-rich repeats and immunoglobulin-like domains protein 1 :LRIG1_HUMAN
2	b		G 1 (A)	non-polymer(CL)	CHLORIDE ION	562S(N) 563Y(R) 592S(Q) (identity: 0.0 %/28.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4u7l_A_1 identity=28.1%

queryA       398:TINLGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIG: 497
                :  **  *    **   *    **   **  *           *    * *  *   *                               ****** *    :
4u7l_A_1      33:SLNLSYNKLSEIDPAGFEDLPNLQEVYLNNNELTAVPSLGAASSHVVSLFLQHNKIRSVEGSQLKAYLSL----------------EVLDLSLNNITEVR: 116
SecStr          :EEE  SS      GGG  S TT  EEE  SS  SS    GGGGGG  EEE  SS      HHHHTT TT ---------------- EEE  SS   EE :    
ExpBur          :bbebbebebeebeeeebeebeebebbebbbbebeebbebeebbeebbbbebbebebeebbbeebeebeeb----------------eebbbbebebeebe:    

queryA       498:PNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIY: 597
                :   *   * *  ***  *       *           * *  **       *   *  *  ***  *     * * *      *    * ** *  *** :
4u7l_A_1     117:NTCFPHGPPIKELNLAGNRIGTLELGAFDGLSRSLLTLRLSKNRITQLPVRAF-KLPRLTQLDLNRNRIRL-IEGLT-----FQGLNSLEVLKLQRNNIS: 209
SecStr          :GGGS SSS  SEEE TTS   EE TTTTGGGTTT  EEE  SS      TT  -  TT  EEE  SS   E-E TTT-----TTT TT  EEE TTS   :    
ExpBur          :eebbeeebebeebbbbebebeeeeebbbeebbebbebbebbebebeebeeebb-ebeebeebbbbebebee-beeeb-----bebbeebebbebbebebe:    
Contact         :                                                                bb                            b     

queryA       598:TLTDKY----------NLESKSLVELVFSG--------NRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFF: 679
                : ***             **  **** * **          *    *               *  * ** * *     *    *           *     :
4u7l_A_1     210:KLTDGAFWGLSKMHVLHLEYNSLVE-VNSGSLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLSVLRLSH-NSISHI: 307
SecStr          :EE TTTTTT TT  EEE  SS  S -B GGGGTT TT  EEE TTS    B SGGGGG TT  EEE  SS   EE TTTTTT TT  EEE  S-S   EE:    
ExpBur          :ebeebbbeebeebebbbbbebebee-bebebbebbebbeebbbbebebeebeeebbeebeebebbbbbebebeebeeebbbebeebbbbebbe-bebeeb:    

queryA       680:NWTLLQQFPRLELLDLRGNKLLF-LTDSLSDFTS--SLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFEC: 776
                :          *  ***  *       *    *    **  * *  * *        *    * ** *  *        *        *  *      * *:
4u7l_A_1     308:AEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKLTLFGNKIKSVAKRAFSGLEGLEHLNLGGNAIRSVQFDAF--VKMKNLKELHISSDSFLC: 405
SecStr          : TTTTTT TT  EEE  SS   HHHHT   TTTT TT  EEE TTS   EE GGGGTT TT  EEE  S    EE TTTT--TT TT  EEEEEEEEEE :    
ExpBur          :bebbbebbeebeebbbbebebeebbeeeebbbbebeebbebbbebbebeebbeebbebbeebebbbbbebebeebeeebb--eebeebeebebebebbeb:    

queryA       777:TCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELTTCVSD: 825
                : *       *            *   ** *    * ** *      * *:
4u7l_A_1     406:DCQLKWLPPWL---IGRMLQAFVTATCAHPESLKGQSIFSVPPESFVCD: 451
SecStr          :STTTTTHHHHH---HHTT  TTEEEEEEESTTSTT BTTTS GGG    :    
ExpBur          :beebebbbebb---eeeebeeebebebbeeeebeeeebeebeeeebeee:

Protein Model on 4u7l_A_1_G_1 (TEMPLATE: 4u7l )

Input Residue Numbers for Focused Sites