[pdbjlvh2]Protein Model on 4u06_A_1_H

Protein Model on 4u06_A_1_H_1 (TEMPLATE: 4u06 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [344 aa]	LIC10831 :Q72U33_LEPIC
2	b		H 1 (A)	non-polymer(CL)	CHLORIDE ION	490L(E) (identity: 0.0 %/33.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4u06_A_1 identity=33.4%

queryA       304:AAWFKNMPHLKVLDL---EFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTIN: 400
                :     *     ****   *   *  **        *  *  * *  *      ** *        *  *  * **      *         ** **    :
4u06_A_1       6:TKALQNPLEVRVLDLSRQELKTLPIEIGK------LKNLQRLYLHYNQL-TVLPQEI------EQLKNLQLLYLRSNRLTTLPKE----IEQLKNLQVLD:  88
SecStr          :HHHHHSGGG SEEE TTS  SS  GGGGG------ TT  EEE  SS  -    GGG------GG TT  EEE  SS      GG----GGG TT  EEE:    
ExpBur          :eebbeeeeebebbebbeeebeebeeebbe------beebeebbbbebbb-eebbebb------eebeebebbebbebebeebbee----beebeebebbb:    

queryA       401:LGINFIKQIDFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQ: 500
                :** *          *   **   **  **   * **  *                * *      **    * *    *     * * ** *  *   *  :
4u06_A_1      89:LGSNQLTVLPQEIGQ-LKNLQLLYLHSNRLTTLSKDIEQ-----------LQNLKSLDL-----SNNQLTTLPNEIEQLKNL-KSLYLSENQ-FATFPKE: 169
SecStr          :  SS  S   GGGGG- TT  EEE  SS  SS  GGGGG----------- TT  EEE ----- SS  S   GGGGG TT - EEE  SS - SS  GG:    
ExpBur          :bbebebeebbebbbe-beebeebebeebebeebbeebee-----------beebebbbb-----bebebeebbebbeebeeb-ebbebbebe-beebbee:    
Contact         :                                                                                         b          

queryA       501:FENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLT: 600
                :   *     * *  * *       *        ** *  * *          *  *  ******        *           **  * *  *   ** :
4u06_A_1     170:IGQLQNLKVLFL--NNNQITILPNEIAKLKKLQYLYLSDNQL-ITLPKEIEQLKNLQTLDLSYNQLUILPKEVGQ-------LENLQTLDLRNNQLKTLP: 259
SecStr          :GGG TT  EEE -- SS   B  GGGGG TT  EEE  SS  - B  GGGGG TT  EEE  SS  S   GGGGG------- TT  EEE  SS      :    
ExpBur          :bbebebbebbeb--eebebeebbebbbebeebbebebbebeb-eebbeebeebeebebbbbbebebeebbebbbe-------beebeebbbeebebeebb:    

queryA       601:DKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDN: 674
                :       * *  *  * * * **              ****  * *  * *   ***        *  *  * *:
4u06_A_1     260:KEIE-QLKNLQTLFLSNNQLTILPQE--------IGKLKNLLWLSLVYNQLTTLPNE--IEQLKNLQTLYLNNN: 322
SecStr          :GGGG-G TT  EEE  SS      GG--------GGG TT  EEE  SS      GG--GGG TT  EEE  SS:    
ExpBur          :eebe-ebeebeebebeebebeebbee--------bbebeebeebbbeebebeebeee--beebeebebbebbeb:

Protein Model on 4u06_A_1_H_1 (TEMPLATE: 4u06 )

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