[pdbjlvh2]Protein Model on 4r5c_A_1_B

Protein Model on 4r5c_A_1_B_1 (TEMPLATE: 4r5c )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [304 aa]	Leucine rich repeat protein
2	b		B 1 (A)	non-polymer(EDO)	1,2-ETHANEDIOL	259R(T) 260C(D) 261F(I) 262N(S) 279D 280R(I) 281F(S) 282A (identity: 25.0 %/36.5 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4r5c_A_1 identity=36.5%

queryA        43:DSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITN-ESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITD-GAFLNLKNLRELLLEDNQLPQI: 140
                :*   **     *     *      **   *  *       * ** * *        ***            *    *  *   * **  * *  ***   :
4r5c_A_1      14:DDAFAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYL--------PNVRY------LALGGNKLHDISALKELTNLGWLNLSNNQLETL:  99
SecStr          :SHHHHHHHHHHTT S TTSEE HHHHHT  EEE TTS     TTGGG --------TT  E------EE TTS  S  GGGGG TT  EEE TTS     :    
ExpBur          :beebbebbbeebeeeebeeebebeebeebeebebeeeebeebebbeeb--------eebee------bbbbbbebeebebbeebeebeebbbbebbbeeb:    

queryA       141:PSGLPESLTELSLI--QNNIYNITKEGI-SRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKL---PSSLRKLFLSNTQI: 234
                :* *  * ** *      **       *   **  *  * *  *         *    **** ****  * ** * *   *         *  * *** * :
4r5c_A_1     100:PQGVFEKLTNLTTLNLSNNQLTSLPQGVFERLASLTTLNLSNN-------QLTSLPQGVFERLTNLTTLNLSNNQLTSLPQGVFERLTNLTTLNLSNNQL: 192
SecStr          : TTTTTT TT  EEE TTS      TTTTTT TT  EEE  SS-------      TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS  :    
ExpBur          :eebbbeebeebebbebbebebeebeeebbeebeebeebbbbeb-------ebeebeeebbeebeebeebbbbebebeebeeebbeebeebeebbbbebeb:    

queryA       235:KYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINI------DRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIA: 328
                :       *  *  *  **** *      *       *             *  *  **  *  * **      * *   **   *  ***  *     * :
4r5c_A_1     193:TSLPQGVFERLTSLHTLDLSNNGITDISA---LKNLDNLHTLDLSNNGITDISALKNLDNLHTLDLSNNGITDISA--LKNLTSLHTLDLSNNG----IT: 283
SecStr          :    TTTTTT TT  EEE  SS     GG---GTT TT  EEE  SS     GGGTT TT  EEE  SS     GG--GTT TT SEEE  SS ----  :    
ExpBur          :eebeeebbeebeebeebebbebebeebeb---beebeebeebebbebebeebebbeebeebeebebbebebeebeb--beebeebeebebbebe----be:    
Contact         :                        bbbb                      bbbb                                              

queryA       329:SGAFLTMLPRLEILDLSFNYI: 349
                :    *  *  ** ***  * *:
4r5c_A_1     284:DISALKNLDNLETLDLRNNGI: 304
SecStr          :  GGGGG S  SEEE  SS  :    
ExpBur          :eeebbeebeeeeeebeeebee:

Protein Model on 4r5c_A_1_B_1 (TEMPLATE: 4r5c )

Input Residue Numbers for Focused Sites