[pdbjlvh2]Protein Model on 4qdh_A_1_H

Protein Model on 4qdh_A_1_H_1 (TEMPLATE: 4qdh )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [402 aa]	Variable lymphocyte receptor B, Toll-like receptor 9 chimera :Q4G1L2_EPTBU:TLR9_MOUSE:Q4G1L2_EPTBU
2	b		H 1 (A)	non-polymer(SO4)	SULFATE ION	601D(S) 602K(S) 603Y(H) (identity: 0.0 %/40.1 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4qdh_A_1 identity=40.1%

queryA       486:LDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTN: 585
                :* ** *    * *  * **    ** ** ** **   *  *        ***  * **        **  *  *******  *      *   *      :
4qdh_A_1      64:LSLSRNNLVTIKPEMFVNLSRLQCLSLSHNSIAQAVNGSQFLPLTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFXXXXIGHNFSFVTHLSM: 163
SecStr          :EE  SS      GGGGTT TT SEEE  SS    B SS SSTT TT  EEE  SS  B   TTTTTT TT  EEE  S  S  ----     THHHH TT:    
ExpBur          :bbbbebebeebeeebbeebeebeebbbbebebebebebebbeebeebeebebbebebbbbeeebbebbebbeebebbebeeee----ebeebebbeebee:    

queryA       586:LKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQ: 685
                :*  * * ** * *      * * *   * ****     * *    *   * **  *  **** * *         *** **  *   ** * ***** * :
4qdh_A_1     164:LQSLSLAHNDIHTRVSSH-LNSNSVRFLDFSGNGMGRMW-DEGGLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFNWTSLS: 261
SecStr          :  EEE TTS   SSS S - EESS  EEE TTS HHHHH-HSTTTTTTTTTEETT  EEE TTS  S   HHHHHTS TT  EEE TTS  S   GGGGG:    
ExpBur          :beebbbbebebeeebeee-bebebbeebbbbebbbbebb-eeeeebeebbeebeebeebebbebebeebeeebbebbbeebeebbbeebebeebebebbe:    
Contact         :               bbb                                                                                  

queryA       686:QFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKS------------ALETKT-----------TT: 762
                :  * ** *** ** *  **         *  *  * * *      *      **   ** * ***   *            ** *              *:
4qdh_A_1     262:FLPNLEVLDLAGNQLKALTNGTLPNGTLLQKLDVSSNSIVSVVPAFFALAVELKEVNLSHNILKTVDRSWFGPIVMNLKELALDTNQLKSVPDGIFDRLT: 361
SecStr          :G TT  EEE TTS   SB SS   TT    EEE TTS    B TTSSTT TT  EEE  SS      TTTS TTGGG SEEE  SS      TTTTTT T:    
ExpBur          :ebeebeebbbbebebebbeeeebbeebebeebbbbebebeebeeebbeebeebeebebbebebeebeeebbbebbbebeebbbbebebeebeeebbeebe:    

queryA       763:KLSMLELHGNPFECTCDIGDF-RRWMDE: 789
                : *    ** **  * *   *   **   :
4qdh_A_1     362:SLQKIWLHTNPWDCSCPRIDYLSRWLNK: 389
SecStr          :T  EEE  SS B   HHHHHHHHHHHHH:    
ExpBur          :ebeebebeebebebeeeebebbbebbee:

Protein Model on 4qdh_A_1_H_1 (TEMPLATE: 4qdh )

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