[pdbjlvh2]Protein Model on 4pq8_A_1_B

Protein Model on 4pq8_A_1_B_1 (TEMPLATE: 4pq8 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [241 aa]	DESIGNED PROTEIN OR465
2	b		B 1 (A)	non-polymer(CL)	CHLORIDE ION	558V(W) 560D(N) 590N (identity: 33.3 %/36.4 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:4pq8_A_1 identity=36.4%

queryA       512:LSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLV: 611
                :   **      *      * * ** *  * *     *** **  *  * ** *       **          ***  **** *    *            :
4pq8_A_1      54:IANNSDIKSVQGIQY--LPNVRYLALGGNKLH--DISALKELTNLGWLNLSNNQLETLPQGV------FEKLTNLTTLNLSNNQLTSLPQ----------: 133
SecStr          :E TTS     TTGGG-- TT  EEE TTS   --  GGGTT TT  EEE  SS      TTT------TTT TT  EEE  SS      T----------:    
ExpBur          :ebeeeebeebebbee--beebeebbbbebebe--ebebbeebeebbebbbbebebeebeeeb------beebeebebbbbbebebeebbe----------:    
Contact         :                                              b b                             b                     

queryA       612:ELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFT: 711
                :                       *  *  ** * ** * *   *   *  *   ** *    * *             *  * *  * *  *        :
4pq8_A_1     134:---------------------GVFERLASLTTLNLSNNQLTSLPQGVFERL-TNLTTLNLSNNQLTSLPQGVFERLTNLTTLNLSNNQLTSLPQGVFERL: 211
SecStr          :---------------------TTTTT TT  EEE  SS      TTTTTT -TT  EEE  SS      TTTTTT TT  EEE  SS      TTTTTT :    
ExpBur          :---------------------ebbeebeebeebbbbebebeebeebbbeeb-eebeebbbbebebeebeeebbeebeebeebbbbebebeebeeebbeeb:    

queryA       712:SSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLL: 748
                : ** ** ** *    ** *       ** * ** * *:
4pq8_A_1     212:TSLTTLNLSNNQLTSLPQGVFERLTNLKTLNLSNNQL: 248
SecStr          :TT  EEE  SS      TTTTTT TT  EEE  SS  :    
ExpBur          :eebeebebbebebeeeeeebbeebeeeeeeeeeebee:

Protein Model on 4pq8_A_1_B_1 (TEMPLATE: 4pq8 )

Input Residue Numbers for Focused Sites