[pdbjlvh2]Protein Model on 3zyi_A_1_B

Protein Model on 3zyi_A_1_B_1 (TEMPLATE: 3zyi )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [395 aa]	LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 :LRRC4_HUMAN
2	b		B 1 (B)	polymer(polypeptide(L)) [303 aa]	NETRIN-G2 :NTNG2_HUMAN	37D(S) 50S(T) 71S(M) 93N(Q) 131L(E) 133E(F) 150E 152S(W) 154I(R) 174N(R) 176Y(D) 205L(Y) 207S(N) 210F(M) 228F(W) 230S(M) 250L(E) 255G(H) (identity: 5.6 %/37.2 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3zyi_A_1 identity=37.2%

queryA        36:CDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDN: 135
                :*    *   *   *  * * ****        * *  * *  *    *  *  *    *  *   *              *  ***  *  *  * * **:
3zyi_A_1      50:CSCSNQFSKVV--CTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQ--------------IEVGAFNGLASLNTLELFDN: 133
SecStr          :SEE SSS EEE--  SS  SS  S   TT SEEE  SS   EE TTTTTT TT  EEE  SS   E--------------E TTTTTT TT  EEE  SS:    
ExpBur          :beeeeeebbbe--beebebeebbeebbeebbebbbbebebeebeeeebbebeebebbebbbbbbee--------------beebbbeebeebebbbbeeb:    
Contact         : b            b                    b                     b                                     b b  

queryA       136:QLPQIPSGLPESLT---ELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLP-----------: 221
                : *  ****  * *    ** *  * *  *      *   *  * *              *  * ** * **  * *        *   *           :
3zyi_A_1     134:WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLG------ELKKLEYISEGAFEGLFNLKYLNLGMCNIKDMPNLTPLVGLEELEMSG: 227
SecStr          :  SB  TTTSSS TT  EEE  S    EE TTTTTT TT  EEE  ------  TT  EE TTTTTT TT  EEE TTS  SS    TT TT  EEE TT:    
ExpBur          :ebeebbeebbeebebbebbbbeebebeebeeebbeebebbeebbbb------ebeebeeebebbbebbeebebbbbbebebeebbebebbebbeebbbbe:    
Contact         :                 b b b                   b b                            b b  b                b b   

queryA       222:--------------SSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGN: 256
                :              *** **   * *   *    * **  *  * *  *:
3zyi_A_1     228:NHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN: 276
SecStr          :S  SEE GGGGTT TT  EEE TTS   EE TTTTTT TT  EEE  SS:    
ExpBur          :bebeebebebbeebeebeebebbebebeebbbbbbeebeebebbbbbeb:    
Contact         :                    b b                   b    b

Protein Model on 3zyi_A_1_B_1 (TEMPLATE: 3zyi )

Input Residue Numbers for Focused Sites