Protein Model on 3wpg_A_1_H_1 (TEMPLATE: 3wpg )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [728 aa] Toll-like receptor 9 :TLR9_MOUSE
2 b H 1 (B) non-polymer(SO4) SULFATE ION 176Y(F) 205L(H) (identity: 0.0 %/34.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3wpg_A_1 identity=34.4%
queryA        35:PCDEKKQNDSVIAECSNRRLQEVPQ----TVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
                :**  *         *    *  **           * * *  * * *  *  *  * **   **  *             *    *    **    * **:
3wpg_A_1      13:PCELKXXG---LVDCNWLFLKSVPRFXXXASCSNITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWN--CPPTGXXXXXXSCHMTIEPRTFLAMRTLEEL: 107
SecStr          :TSEE -- ---EEE TTS  SS    ---   SS  EEE TT    EE TTTTGGGTT  EEE TTS--B    ------    EE TTTGGG TT  EE:    
ExpBur          :ebeee--e---bbebbebebeebbee---eebeebeebbbbebebeebebebbeebeebebbbbeeb--bebee------ebebeeeeebbeebeebeeb:    

queryA       131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCE-KTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFL: 229
                : *  *     *  ** **  ***   **          *  *  *    ***    *        *    *  *  ***  * *  **  ** **  *  :
3wpg_A_1     108:NLSYNGITTVPR-LPSSLVNLSLSHTNILVLDANSLAGLYSLRVLFMDGNCYYKNPCTGAVKVTPGALLGLSQLTHLSLKYNNLTKVPRQLPPSLEYLLV: 206
SecStr          :E  SB  SS   -  TT  EEE TTS   EE TTTTTT TT  EEE   SSBTTB  SS  EE TTTTTT TT  EEE  SS  SS  SS  TT SEEE :    
ExpBur          :bbbebbbeebbe-bbeebeebbbbbbebeebeeebbeebeebebbebbbbbbeebeeeeebebeeebbeebeebbebbbeebebeebbeebbeebeebeb:    
Contact         :                                             b                             b                        

queryA       230:SNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIAS: 329
                :*   *     **   *  *  **  *** **  ** **  * *  *       *  *  *  * *   **   *  **     * ****  * *   *  :
3wpg_A_1     207:SYNLIVKLGPEDLAQLTSLRVLDVGGNCRRCDHAPNPCIEC-GQKSLHLHPETFHHLSHLEGLVLKDSSLHTLNSSWFQGLVQLSVLDLSENFLYESITH: 305
SecStr          : SS   EE TTTTTT TT SEEE TTSSB  TT SS   B -SSSS EE TTTTTT TT  EEE TTS  SS  GGGTTT TT  EEE TTSS TTHHHH:    
ExpBur          :bbbebeebbeebbeebeebebbbbbbbbebbeeeeeeeeeb-eeeebebeeebbeebeebebbbbebbbbeebeebbbebbeebeebbbbebbbbebbbe:    

queryA       330:GAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENR: 429
                :      * **  * ***** *            *  * **  *   *  *  *       *  ** * *  *  *** *     *  *  *    ** **:
3wpg_A_1     306:TNAFQNLTRLRKLNLSFNYRKXXXXARLHLASSFKNLVSLQELNMNGIFFRLLNKYTLRWLADLPKLHTLHLQMNFINQAQLSIFGTFRALRFVDLSDNR: 405
SecStr          :  TTSS  S  EEE TT    ----      GGGGG TT  EEE TT    EE TTTTGGGTT TT  EEE  SS   EE GGGGGT SS  EEE  SS :    
ExpBur          :bebbeebeebeebbbbebbee----eebebbebbeebebbebbbbbbbebebbbeebbeebbebeebebbbbeebebeebebbbbeebeebeebbbbebe:    

queryA       430:IS-PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSA: 528
                :** *                                       *      *       *** *    * *  *  *    ** ** ** **   *  *  :
3wpg_A_1     406:ISGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDR------CKNFKFTMDLSRNNLVTIKPEMFVQLSRLQCLSLSHNSIAQAVNGSQFLP: 499
SecStr          :  SS  -----------------------------------   ------ TTTS EEE TTS  SS  GGGGTT TT  EEE TTS    B  S S TT:    
ExpBur          :bebeee-----------------------------------eee------beeeebbbebbebebeebeeebbeebeebebbbbbebebebebebebbeb:    

queryA       529:IPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDD: 628
                :      ***  * **        **  *  *******      *  *   *      *  * * ** * *      * * *   * ****     * *  :
3wpg_A_1     500:LTNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQXXXXXGIGHQFSFVTHLSMLQSLSLAHNDIHTRVSSH-LNSNSVRFLDFSGNGMGRMW-DEG: 597
SecStr          : TT  EEE  SS  B   TTTTTT TT  EEE TT   -----  S BTGGGGG TT  EEE TT    TTB S - EESS  EEE TTS HHHHT-TST:    
ExpBur          :beebebbbbbebebebeeeebbebbeebebbbbbebee-----eeeebbbbbeebeebebbbbbebeeeeebbee-bebebbeebbbbebbbbebb-eee:    

queryA       629:NRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLP: 728
                :  *   * **  *  **** * *         *** **  *   ** * ***** *   * ** *** ** *  **         *  *  * * *    :
3wpg_A_1     598:GLYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTQGTLPNGTLLQKLDVSSNSIVSVV: 697
SecStr          :TTTTTTTTEETT  EEE TTS  S   HHHHHTS TT  EEE TTS      GGGGGG TT  EEE TTS    B S    TT    EEE TTS    B :    
ExpBur          :eebbebbeebeebeebebbebebeebeeebbebbbeebeebbbeebebeebebebbeebeebeebbbbebebeebeebebbeebebeebbbbebebeebe:    

queryA       729:SGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVD-VICASPGDQRGKSIVSLELTTC: 822
                :  *      **   ** * ***   *         *  *    **  * *               * * *   * * ***   * **    *  *:
3wpg_A_1     698:PAFFALAVELKEVNLSHNILKTVDRSWF-GPIVMQLTVLDVRSNPLHCACGAAFVDLLLE--VQTKVPGLANGVKCGSPGQLQGRSIFAQDLRLC: 789
SecStr          :TTSSTT TT  EEE TTS  S   GGGT-GGGGGT SEEE  S  EE  TT SHHHHHHH--TGGGSTTTTTTSBEEESTTTBTSBTTSS TT  :    
ExpBur          :eebbeebeebeebbbbebebeebeeebb-eebbeebeebbbeebebebeeebebbebbbe--beeebebbbeebebeeeeebeeebbbeeebeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123