Protein Model on 3wpf_A_1_G_1 (TEMPLATE: 3wpf )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [740 aa] Toll-like receptor 9 :TLR9_MOUSE
2 b G 1 (A) non-polymer(SO4) SULFATE ION 611V(R) (identity: 0.0 %/34.4 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3wpf_A_1 identity=34.4%
queryA        35:PCDEKKQNDSVIAECSNRRLQEVPQ----TVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
                :**  *         *    *  **           * * *  * * *  *  *  * **   **  *             *    *    **    * **:
3wpf_A_1      13:PCELKPHG---LVDCNWLFLKSVPRFXXXASCSNITRLSLISNRIHHLHNSDFVHLSNLRQLNLKWN--CPPTGLSXXXXSCHMTIEPRTFLAMRTLEEL: 107
SecStr          :TSEEETTT---EEE TTS  SS    ---  STT  EEE TT    EE TTTTGGGTT SEEE TTS--B SS   ----    EE TTTTTT TT  EE:    
ExpBur          :ebeeeeee---ebbbbebeeeebbee---eebeebeebbbbebebeebeeebbeebeebeebebeeb--bbbeeee----ebebeeeeebbeebeebeeb:    

queryA       131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCE-KTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFL: 229
                : *  *     *  ** **  ***   **          *  *  *    ***    *        *    *  *  ***  * *  **  ** **  *  :
3wpf_A_1     108:NLSYNGITTVPR-LPSSLVNLSLSHTNILVLDANSLAGLYSLRVLFMDGNCYYKNPCTGAVKVTPGALLGLSQLTHLSLKYNNLTKVPRQLPPSLEYLLV: 206
SecStr          :E  SB  SS   -  TT  EEE TTS   EE GGGGTT TT  EEE   SSBTTB  SS  EE TTTTTT TT  EEE  SS  SS  SS  TT SEEE :    
ExpBur          :ebbebbbeebbe-bbeebbebbbbbbebeebeeebbeebeebebbebbbbbbeebebeeebebeeebbeebeebbebbbeebebeebbeebbeebeebbb:    

queryA       230:SNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIAS: 329
                :*   *     **   *  *  **  *** **  ** **  * *  *       *  *  *  * *   **   *  **     * ****  * *   *  :
3wpf_A_1     207:SYNLIVKLGPEDLAQLTSLRVLDVGGNCRRCDHAPNPCIEC-GQKSLHLHPETFHHLSHLEGLVLKDSSLHTLNSSWFQGLVQLSVLDLSENFLYESITH: 305
SecStr          :TTS   EE GGGSTT TT SEEE TTSSB  TT SS   B -SSSS EE TTTTTT TT  EEE  SS      HHHHTT  S  EEE  SSS HHHHTT:    
ExpBur          :bbbebeebbeebbeebeebeebbbbbbbbbbeeeeeeeeeb-eeeebebeeebbeebeebebbbbbbbbbeebeebbbeebeebeebbbbebbbbbbbee:    

queryA       330:GAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENR: 429
                :      * **  * ***** *            *  * **  *   *  *  *       *  ** * *  *  *** *     *  *  *    ** **:
3wpf_A_1     306:TNAFQNLTRLRKLNLSFNYRKKVSFARLHLASSFKNLVSLQELNMNGIFFRLLNKYTLRWLADLPKLHTLHLQMNFINQAQLSIFGTFRALRFVDLSDNR: 405
SecStr          : STTSS TT  EEE TT   SSS        GGGGG TT  EEE TT   SEE TTTTGGGTT TT  EEE  SS   EE GGGGGS SS  EEE  SS :    
ExpBur          :bebbeebeebeebebbebeeeeeeeeebebbebbeebeebeebbbbbbebeebbeebbeebbebeebebbbbeebebeebebbbbeebebbeebbbbebe:    

queryA       430:ISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAI: 529
                :**                                      *        *       *** *    * *  *  *    ** ** ** **   *  *   :
3wpf_A_1     406:ISGPSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNFMD-----RCKNFKFTMDLSRNNLVTIKPEMFVQLSRLQCLSLSHNSIAQAVNGSQFLPL: 500
SecStr          :  S   ---------------------------------  S -----   SSS EEE  SS  SS  GGGGTT TT  EEE  SS    B  S S TT :    
ExpBur          :bebeee---------------------------------eebb-----ebeeeebbbebbebebeebeeebbeebeebebbbbbebebebebebebbeeb:    

queryA       530:PHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDN: 629
                :     ***  * **        **  *  *******  *   *  *   *      *  * * ** * *      * * *   * ****     * *   :
3wpf_A_1     501:TNLQVLDLSHNKLDLYHWKSFSELPQLQALDLSYNSQPFXXXGIGHQFSFVTHLSMLQSLSLAHNDIHTRVSSH-LNSNSVRFLDFSGNGMGRMW-DEGG: 598
SecStr          :TT  EEE  SS  B   TTTTTT TT  EEE TT     ---  S BTGGGGG TT  EEE TT    TTB S - EESS  EEE TTS HHHHH-TT S:    
ExpBur          :eebebbbbbebebebeeeebbebbeebebbbbbebebee---eeeebbebbeebeebebbbbbebeeeeebbee-bebebbeebebbebebbebb-eeee:    
Contact         :                                                                                 b                  

queryA       630:RYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPS: 729
                : *   * **  *  **** * *         *** **  *   ** * ***** *   * ** *** ** *  **         *  *  * * *     :
3wpf_A_1     599:LYLHFFQGLSGLLKLDLSQNNLHILRPQNLDNLPKSLKLLSLRDNYLSFFNWTSLSFLPNLEVLDLAGNQLKALTQGTLPNGTLLQKLDVSSNSIVSVVP: 698
SecStr          :TTTTTTTEETT  EEE TTS      HHHHHTS TT  EEE TTS      GGGGGGSTT  EEE TTS    B S    TT    EEE TTS    B T:    
ExpBur          :ebbebbeebeebeebebbebebeebeeebbebbbeebeebbbeebebeebebebbeebeebeebbbbebebebbeeeebbeebebeebbbbebebeebee:    

queryA       730:GFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVD-VICASPGDQRGKSIVSLELTTC: 822
                : *      **   ** * ***   *         *  *    **  * *               * * *   * * ***   * **    *  *:
3wpf_A_1     699:AFFALAVELKEVNLSHNILKTVDRSWF-GPIVMQLTVLDVRSNPLHCACGAAFVDLLLE--VQTKVPGLANGVKCGSPGQLQGRSIFAQDLRLC: 789
SecStr          :TTTTT TT  EEE  SS  S   GGGT-GGGGGT SEEE  SS EE  TT THHHHHHH--TGGGSTTTTTTSBEEESTTTBTSBTTSS GGG :    
ExpBur          :ebbeebeebeebebbebebeebeeebb-eebbeebeebbbeebebebeeebebbebbbe--beeebeebbeebebeeeeebeeebbbeeebeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123