Protein Model on 3wpe_A_1_A_2
(TEMPLATE: 
3wpe
)Protein Model on 3wpe_A_1_A_2
(TEMPLATE: 3wpe
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [714 aa] | Toll-like receptor 9 :TLR9_BOVIN | |
| 2 | b | A 2 (A) | polymer(polypeptide(L)) [714 aa] | Toll-like receptor 9 :TLR9_BOVIN | 107P 108G(M) 109I(H) 183F(Y) 184N(M) 262N(H) 264P(R) 265F(N) 266P 346F 403I(L) 405F 427E(D) 490L(R) 491N 492S(N) 494F(V) 514A(H) 515N 516S 518A(S) 541R(K) 566H(Q) 570I(M) 571A(Q) 572G 599L(R) 625N(A) 626D(E) 630R(L) 653H(T) 655P(L) 657E(R) 678F 749K 805S (identity: 30.6 %/36.9 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3wpe_A_1 identity=36.9% |
queryA 35:PCDEKKQNDSVIAECSNRRLQEVPQ-TVGKY---VTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
:** * * ** * ** * * * * * * * ** ** * * * ** * **:
3wpe_A_1 13:PCELQPHGQ---VDCNWLFLKSVPHFSAGAPRANVTSLSLISNRIHHLHDSDFVHLSNLRVLNLKWN--CPPAGLSPMHFPCRMTIEPNTFLAVPTLEEL: 107
SecStr :TSEE STTE---EE TTS SS TTS GGG EEE TT EE TTSSTT TT EEE TTS--B TTTSTT EE TTTTTT TT EE:
ExpBur :ebeeeeeee---bebeeeebeebbebeeebebeebbbbbbebbebeebeeebbeebeebeebebeeb--bbbeebbeeeeebebeeeeebbeebeebeeb:
Contact : bbb
queryA 131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKT-NIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFL: 229
: * * * ** *** * * * ** *** * * * ** *** * * ** ** ** * *:
3wpe_A_1 108:NLSYNGITTVPALP-SSLVSLSLSHTSILVLGPTHFTGLHALRFLYMDGNCYYMNPCPRALEVAPGALLGLGNLTHLSLKYNNLTEVPRRLPPSLDTLLL: 206
SecStr :E SB S -TT EEE TTSS EE SGGGTT TT EEE SSBTTB SS EE TTTTTT TT EEE SS SS SS TT SEEE :
ExpBur :ebbebbbeebbebb-eebebbbbbbbebeebbeeebeebeebeebebbbbbbeebebeeebebeeebbeebeebbebbbeebebeebbeebbeebebbbb:
Contact : bb
queryA 230:SNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGG-ASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIA: 328
:* * ** * * ** *** ** * ** * * * * * * * ** * ** * **** * * * :
3wpe_A_1 207:SYNHIVTLAPEDLANLTALRVLDVGGNCRRCDHARNPCRECPKNFPKLHPDTFS--HLSRLEGLVLKDSSLYKLEKDWFRGLGRLQVLDLSENFLYDYIT: 304
SecStr :TTS B GGGGTT TT SEEE TTSS TTS SS TT B GGGGT--T TT EEE TTS SS HHHHTT TT EEE TTSSTTTHHH:
ExpBur :bbbebbebbeebbeebeebeebbbbbbbbbeeeeebeeeebeeeeeeeeeebbe--ebeebebbbbebbbbeebeeebbeebeebbebbbbbbbbbebbe:
Contact : b bbb
queryA 329:SGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSEN: 428
: * * * ***** * * * * ** * * * * * * ** * * *** * * * * ** *:
3wpe_A_1 305:KTTIFNDLTQLRRLNLSFNYHKKVSFAHLHLASSFGSLVSLEKLDMHGIFFRSLTNITLQSLTRLPKLQSLHLQLNFINQAQLSIFGAFPSLLFVDLSDN: 404
SecStr :H TTTT TT EEE TT SS BS GGGG TT EEE TTS BSEE TTTTGGGGG TT EEE SS SEE GGGGGG SS EEE SS:
ExpBur :ebebbeebeebeebebbbbbeeeeeeeebebbebbeebebbeebbbbbbbbeebbeebbebbeebeebeebbbbebebeeeebebbeebeebeebbbbeb:
Contact : b b b b
queryA 429:RISPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKA-------------------------------------------: 485
:*** :
3wpe_A_1 405:RIS------------------------------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSCN: 450
SecStr : ---------------------------------------------------------------------------------------------- T:
ExpBur :ebe----------------------------------------------------------------------------------------------ebe:
queryA 486:----LDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQ: 581
: **** * * * * ** ** ** * * * *** * ** *** ** ******* * ** * * * :
3wpe_A_1 451:LNFTLDLSRNNLVTIQQEMFTRLSRLQCLRLSHNSISQAVNGSQFVPLTSLRVLDLSHNKLDLYHGRSFTELPQLEALDLSYNSQPFSMQGVGHNLSFVA: 550
SecStr :TS EEE SS S GGGGTT TT EEE S B S SSTT TT EEE SS B STTTTTT TT EEE S HHHHT TT B GGGG:
ExpBur :eebbbbbbebebeebeeeebeebeebebbebbebebebebebebbeebeebebbbbbebebebeebebbebbeebebbebbebeebbeeeeeebebebbe:
Contact : bbb b bbb b b b bbb
queryA 582:NFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNW: 681
: * * * ** * * * ** * **** * * * * **** ** **** * * *** ** * ** * ****:
3wpe_A_1 551:QLPSLRYLSLAHNGIHSRVSQ-KLSSASLRALDFSGNSLSQMWAEGD-LYLCFFKGLRNLVQLDLSENHLHTLLPRHLDNLPKSLRQLRLRDNNLAFFNW: 648
SecStr :G TT EEE TTS SSB S- BSS EEE SS HHHHTTSTT-TTTTTTTTBTT EEE SS S HHHHHTS TT SEEE TT S S:
ExpBur :ebeebeebbbbebebbbebbe-ebebebbebbbbbbbbbeebbeeee-ebbbbbebbeebeebbbbebebeebeeebbebbbebbeebebeebebeebeb:
Contact : b bb b b b b b
queryA 682:TLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIG: 781
: * **** *** ** * * * * * * * ** * * ** * *** * * * * ** * :
3wpe_A_1 649:SSLTVLPRLEALDLAGNQLKALSNGSLPPGIRLQKLDVSSNSIGFVIPGFFVRATRLIELNLSANALKTVDPSWFGXXAGT-LKILDVSANPLHCAXXXA: 747
SecStr :GGGGG TT EEE TTS EE SS S TT EEE TTS EE TTSSTT TT EEE SS S GGG -- TT- EEE S EE --- :
ExpBur :ebbeebeebebbbbbebebebbbeeebbeebebeebbbbebebeebeeebbeebeebeebbbbebebeebeeebbe--eee-beebebeebebeee---e:
Contact : b
queryA 782:DFRRWMDEHLNVKIPRLVDVICASPG: 807
: * * * * ***:
3wpe_A_1 748:-FVDFLLERQEAVPXXXXXVTCGSPG: 772
SecStr :-HHHHHHHTTTT ----- EEE :
ExpBur :-beebbeebeebbe-----eeeeeee:
Contact : b
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[assembly_id:1]
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