Protein Model on 3w3k_A_1_I_1 (TEMPLATE: 3w3k )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [746 aa] Toll-like receptor 8 :TLR8_HUMAN
2 b I 1 (A) non-polymer(L07) 2-propyl[1,3]thiazolo[4,5-c]quinolin-4-amine 543D 545D 572G 573V 574T (identity: 100.0 %/94.8 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:3w3k_A_1 identity=94.8%
queryA        31:SRSYPCDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLREL: 130
                :*********     ********************************************************            ******************:
3w3k_A_1       9:SRSYPCDEKXXXXXVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVXXXXXXXXXXXXGLNITDGAFLNLKNLREL: 108
SecStr          :    SSEE ----- EEE TTS  SS  S   TT  EEE TTS   EE TTTSTT SS  EEE  S S  ------------  EE TTTTTT SS  EE:    
ExpBur          :ebeebbbee-----eebebeebebeebbeebeeebeebebbebebeebeeebbeebeebeebbbbebeee------------ebebeebbbeebeebeeb:    

queryA       131:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 230
                :****************************************************************************************************:
3w3k_A_1     109:LLEDNQLPQIPSGLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLS: 208
SecStr          :E  SS  SS  SS  TT SEEE  SS   EE HHHHTT TT  EEE  SSS TT      EE TTTTTT TT  EEE  SS  SS  SS  TT  EEE T:    
ExpBur          :bbbebebeebbeebbebbbbbbbbbbebeebeeebbbebeebebbebbbbbeeeeeeeebeeeebbbeebeebebbbbbbbbbeebbeebbebbeebebb:    

queryA       231:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 330
                :****************************************************************************************************:
3w3k_A_1     209:NTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASG: 308
SecStr          :TS   EE TTTSTT SS  EEE TTSS   TT SS     GGG   EE TTTTTT TT  EEE TTS  SS  GGGGTT TT  EEE  SSSTHHHHHS :    
ExpBur          :bbebeebeeeebeebeebbbbbbbbbbbbeeeeebeeeebeeeeebebeeebbeebeebeebbbbbbbbeebeebbbeebeebebbbbbebebbebbeeb:    

queryA       331:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 430
                :****************************************************************************************************:
3w3k_A_1     309:AFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRI: 408
SecStr          :GGGGG TT  EEE TT   TT   SS    GGGGG TT  EEE TT   SEE GGGGGGGTT TT  EEE  SS   EE GGGGGGSS  SEEE  SS  :    
ExpBur          :ebbebbeebeebbbbbbbeeeeeeeebebbeebeebeebebbbbbbbbbeebebebbebbbebeebbbbbbbebebeebebebbeebeebeebbbbebeb:    

queryA       431:SPLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 530
                :****                        ************************************************************************:
3w3k_A_1     409:SPLVXXXXXXXXXXXXXXXXXXXXXXXXFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIP: 508
SecStr          :    ------------------------  S TTS SSS  S SS HHHHTTS EEE  SS   S  TTTTTT    SEEE  SS       S TTTTST:    
ExpBur          :eeee------------------------eeeebeeeebeeeeebbeeebeeeeebbbbbebebeebbeebbeebbebbbbbbbebebebebebebbeebe:    

queryA       531:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 630
                :****************************************************************************************************:
3w3k_A_1     509:HVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNR: 608
SecStr          :T  EEE  SS      TTTTTT TT  EEE TT HHHHT TTS    GGGGG SS  EEE TT      SS     BSS  EEE  SS HHHHT TT  T:    
ExpBur          :ebebbbbbebebbbeeeebbebbeebbbbbbbebeeebeeeeeebbbbbbeebeebeebbbbebbbebbeeeeebebebbeebbbbbbebeebbeeebee:    
Contact         :            b b                          bbb                                                        

queryA       631:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 730
                :****************************************************************************************************:
3w3k_A_1     609:YISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSG: 708
SecStr          :TTTTTTTBTT  EEE  SS  S   HHHHHTS TT SEEE  SS      GGGGGG TT  EEE  SS      S GGGT S   EEE  SS      TT:    
ExpBur          :beebbeebeebeebbbbebebeebbeebbebbbeebeebbbbebebeebebebbeebeebebbbbebbebeebbeebeebbebbeebbbbebebeebbeb:    

queryA       731:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 817
                :***************************************************************************************:
3w3k_A_1     709:FLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSL: 795
SecStr          : TTT TT  EEE  SS      GGGG  SS    SEEE TT  EE SGGGHHHHHHHHH SSSB   GGGSBEEESTTTTTSBGGG :    
ExpBur          :bbbebebbeebbbbebebeebeeebbeeeeebebeebbbbebebebeeebeebeebbeeeeebebbebbbbebbeeeeeeeebbeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123