CurrentView:HTML5 Change to:[JAVA] |
DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | C 1 (B) | polymer(polypeptide(L)) [601 aa] | CD180 antigen :CD180_MOUSE | |
2 | b | EA 1 (B) | non-polymer(GOL) | GLYCEROL | 259R 274A(Q) (identity: 50.0 %/30.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3t6q_C_1 identity=30.0% |
queryA 212:SLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMP: 311 : * * ** * * * * * ***** *** ** * ** * * * * : 3t6q_C_1 23:GLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLT----RC-------------QIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPK: 105 SecStr : SS TTS TT EEE TT SEE TTTSTT TT SEEE T----T ------------- EE TTTTTT TT EEE TT SEE TTTTSS T: ExpBur :ebeebbeebeeebebbbbbebebeebeeebbeebeebeebbbb----eb-------------ebeebeeebbebbeebebbbbbbbebeebbeebbebbe: Contact : b b queryA 312:HLKVLDLEFNYLVGEIASGAFLTM--LPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGYVFQELREDDFQPLMQLPNLSTINLGINFIKQI: 409 : ** * * * * ** * * * * * * * * * * * * *** ** * * *: 3t6q_C_1 106:ALKHL----FFIQTGISSIDFIPLHNQKTLESLYLGSNHISS-----IKLPKGFPTE-KLKVLDFQNNAIHYLSKEDMSSLQQATNLS-LNLNGNDIAGI: 194 SecStr :T EE----E TTS S GGGS TT SS EEE SS ----- TT S-S EEE SS EE HHHHHTTTT SS E-EE TT EE: ExpBur :ebeeb----ebeebebeebeebbbebbeebebbebbebebee-----bebeeebebe-ebeebbbeebebeebbeebbebbeebeebe-bbbbebebebb: queryA 410:DFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANS---SSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFFIGPNQFENLPD: 506 : * * * * * * * * * * * * * : 3t6q_C_1 195:EPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFED------MDDEDISP---------AVFEGLCEMSVESINLQKHYFFNISSNTFHCFSG: 279 SecStr : TTTTTT EEEEEE TT S HHHHHHHTTT EEEEEE TT------ B G---------GGGGGGGGSEEEEEE TT BSS TTTTGGGTT: ExpBur :eeebbeebebeebbbbbbeebeebbebbeebebeebebbbeee------eeeeebee---------ebbebbeebebebbbbeebebeeeeeebbebbee: queryA 507:IACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEF----IQNFTNLKVLNLSHNNIYTLTDK: 602 : * * * ** * * * * * * * * * * * * ** * ** * *** * * * : 3t6q_C_1 280:LQELDLTATHLSELPSG--LVGLSTLKKLVLSANK--FEN---LCQISASNFPSLTH----LSIKGNTKRLELGTGCLENLENLRELDLSHDDIET-SDC: 367 SecStr : SEEE TTS S SS-- S TT EEE TT -- SB---GGGG GGG TT SE----EE S SS B SSTTTT TT EEE TTS E-EEE: ExpBur :beebebebbebeebeee--bebbeebeebebbebe--bee---beebbbebbeebee----bebeebeeebebbebbbeebeebeebbbbebebeb-eeb: queryA 603:YNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLK-HIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGN---: 698 : ** * * * * ** * *** *** * ** * * * * * * * * ** : 3t6q_C_1 368:CNLQLRNLSHL----QSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHL-LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFP: 462 SecStr :STTTTTT TT ---- EEE S S EEE TTTTTT TT EEE TT EE TT TTTT TT- EEE TT BTT TTTTTT TT EEE TT B G: ExpBur :beebbeebeeb----eebbbbebebbebeeebbeebeebeebebbebebeeeeeebbbeebee-beebebbebebebebeebbeebeebeebbbebbebe: queryA 699:--------------KLLFLTDSLSDFTS-------SLRTL---LLSHNRISHLPSGFLSEVSSLK--HLDLSSNLLKTINKSALETKTTTKLSMLELHGN: 772 : * * * * * ** ***** * * ** * * ** * * * * *: 3t6q_C_1 463:KGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLT---SSSIEALSHLKGIYLNLASNHISIILPSLLPILSQQR--TINLRQN: 557 SecStr :GGEE SS TTTT TT EEE TTS SEE TTSSTT TT EEE SS ---GGGGGGGTT S EEE SS GGGHHHHHHSS--EEE SS: ExpBur :ebebeeebbbeebeebeebbbbebebeebeeebbeebeebeebbbbebebe---bebbebbeebeebbbbbbbbebeebeeebbebbeebe--ebbbeeb: queryA 773:PFECTCDIGDFRRWMDEHLNVKIPRLVDVICASPGDQRGKSIVSLELT: 820 :* *** * * * * * * * ** * : 3t6q_C_1 558:PLDCTCSNIYFLEWYKENMQ-KLEDTEDTLCENPPLLRGVRLSDVTLS: 604 SecStr : EE SGGGHHHHHHHHH GG-GEE GGG BEEESGGGTT BGGG : ExpBur :ebbbeeebbebbebbeebee-ebeebeebebeeeeeeeeeebeebeee: |