[pdbjlvh2]Protein Model on 3rfj_A_1_B

Protein Model on 3rfj_A_1_B_1 (TEMPLATE: 3rfj )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [268 aa]	Internalin B, repeat modules, Variable lymphocyte receptor :D2P9A6_LISM2:Q6E4K6_PETMA
2	b		B 1 (A)	non-polymer(SO4)	SULFATE ION	628D 630R(K) 650R(K) (identity: 33.3 %/30.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:3rfj_A_1 identity=30.9%

queryA       594:NNIYTLTDKYNLESKSLVELVFSG--NRLD-ILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRL: 690
                :      * * **  **    *     *  * *  *  *         * *   * *  * *  *     *     ** *    * *             *:
3rfj_A_1      15:DDAFAETIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVRYLALGGNKLHDI---SALKELTNLTYLILTGNQLQSLPNGVFDKLTNL: 111
SecStr          :SHHHHHHHHHHTT S TT EE HHHHHT  EEE  SS     TTGGG TT  EEE TTS     ---GGGTT TT  EEE TT       TTTTTT TT :    
ExpBur          :bebbbebbbeebeeeebeeebeeeebeebeebebeeeebeebebbeebeebeebbbbebebeeb---ebbeebeebeebbbeebebeebeeebbeebeeb:    
Contact         :                                     b b                   b                                        

queryA       691:ELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTT----------------------TKLSMLE: 768
                :  * *  * *  * *   *    *  * * **    ** *       *  ***  * *           *                       * *    :
3rfj_A_1     112:KELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVPDGVFDRLTSLTHIW: 211
SecStr          :SEEE  SS      TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS      TTTTTT TT  EEE  SS  S   TTTTTT TT  EEE:    
ExpBur          :ebbbbbebebeebbeebbeebeebeebbbeebebeebbeebbeebeebbebbbbebebeebeeebbeebeebebbbbbebebeebeebbbeebeebeebb:    

queryA       769:LHGNPFECTC-DIGDFRRWMDEH: 790
                :*  **  * * **    **   *:
3rfj_A_1     212:LLNNPWDCACSDILYLSRWISQH: 234
SecStr          :  SS B TTBGGGHHHHHHHHH :    
ExpBur          :bbebebebebeebebbbebbeee:

Protein Model on 3rfj_A_1_B_1 (TEMPLATE: 3rfj )

Input Residue Numbers for Focused Sites