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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [632 aa] | Toll-like receptor 5 :TLR5_HUMAN | |
2 | b | A 1 (A) | polymer(polypeptide(L)) [797 aa] | Toll-like receptor 5 :TLR5_HUMAN | 430I(W) 835T(L) 838I(V) 842V(T) (identity: 0.0 %/31.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3j0a_B_1 identity=31.4% |
queryA 276:INIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLR: 375 : ** ** ** ** * * * * ** * * * * * * **** * * * * ** ** : 3j0a_B_1 62:LTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLY-----LHPSFGKLNSLKSIDFS: 156 SecStr : EE SSTTSS TT EEE TT B TTSS S SS EE TT SS STT SS SS EEEEES ----- GGGGT SS EEEEE: ExpBur :eebeeebbeebeebebbbbbebebeeeeeebbebbeebeebebeebebeebebeeebbeebebbbebbbbebebebbe-----bbebbeebeebeebebb: queryA 376:GYVFQELREDDFQPLMQLPNLSTINLGINFIK---QIDF-KLFQNFSN--LEIIYLSENRISPLVKD-----TRQSYANSSSFQRHIRKRRSTDFEF---: 461 : * ** * ** * * * * * * *** * * * * * ** * * : 3j0a_B_1 157:SNQIFLVCEHELEPL-QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI---MGAGFGFHNI: 252 SecStr :SS SGGGHHH-HH SS EE SBS SSS TTTT BSEEB SS SSHHHHTTGGGTS S BSEEE S --- B SSS SSS: ExpBur :ebebeebeeebbeeb-eeeeeeebbbbbbbebebeebeeeeeebbbeebebeebebbbbeeebeebbebbebbbebebebbbebeeb---ebbbebebee: Contact : b queryA 462:-DPHSN-FYHFTRPLIKPQCAAYG----------------KALDLSLNSIFFIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLD: 543 : ** * * * * * * * * * * * * **** * * * * * * ** * : 3j0a_B_1 253:KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS-SNFYGLPKVAYIDLQKNHIA: 351 SecStr :TTTTTTTHHHHTTS EEE TT BB S SSS EEE S B TTTTTT SS EEE S S S- S SS TT EEE S : ExpBur :eeebeebbebbeebebeebbbbebebeebeeebbeebeebebbbbbebebeebeeebbeebeebeebebbebbeeeeee-bbbeebeebbebbbeebebe: queryA 544:FDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNR---LDILWNDDDNRYISIFKGLKN: 640 : * * *** * * * ** * ** * ** * * * ** **** : 3j0a_B_1 352:IIQDQTFKFLEKLQTLDLRDNA-----------LTTIHFIPSIPDIFLSGNKLVTLP-KINL-TANLIHL--SENRLENLDILY---------FLLRVPH: 427 SecStr : SSSS S EEEEET -----------S SS SEEEEES - T-T EEE -- S SSHHHH---------HHTT TT: ExpBur :ebeeebbbebeebebbbbeebb-----------ebbbeebbebeebebbebeebeeb-eeee-ebeebbb--eebebeeebbbe---------bbeebee: queryA 641:LTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKF-----FNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEV: 735 :* * * ** ** * *** * * * * * * * ** * * ** * * : 3j0a_B_1 428:LQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--: 525 SecStr : EEE SS SSSSS S TT EEE S SSS S SS SS B EE HHHHTT TTSTTT S EEEEES SS --: ExpBur :beebbbeebebeebbeeebbbebeebeebebbebebeebbeeebbebbeebbbbbebbebeeeebeebeeebbeebeebebbbbbebebeebebeeeb--: queryA 736:SSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDEHLNVKIPR-LVDVICASPGDQRGKSIVSLELTTCVSDVTAVILFFF: 834 : * ** * * * * ** * * * * * * * * ** * * * * * * ** * * : 3j0a_B_1 526:ANLEILDISRNQLLAPNPDVF-----VSLSVLDITHNKFICECELSTFINWLN-HTNVTIAGPPADIYCVYPDSFSGVSLFSLSTEGCXXXXXXXXXXFS: 619 SecStr :S EEEEEEE S -----SS EEEEEEE SSS HHHHHHH-HTTGGG GGG S SSS S TTT ---------- H: ExpBur :eebeebebbebebbbeeeeeb-----eebeebbbbebebbbeeeeeebeebbe-ebeeeeebeeeebebeebeeeeeeebeeeeeeee----------ee: queryA 835:TFFITTMVM: 843 : * * : 3j0a_B_1 620:LFIVCTVTL: 628 SecStr :HHHHHHHHH: ExpBur :eeeeeeeee: Contact :b b b |