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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [549 aa] | Toll-like receptor 2, Variable lymphocyte receptor B :TLR2_MOUSE:Q4G1L2_EPTBU | |
2 | b | E 1 (A) | non-polymer(PDK) | (10S,13R)-3-{2-[{2-[bis(carboxymethyl)amino]ethyl}(carboxymethyl)amino]ethyl}-10-hydroxy-5,16-dioxo-13-(tetradecanoyloxy)-9,11,15-trioxa-3,6-diaza-10-phosphanonacosan-1-oic acid 10-oxide | 529I 537L(I) 540N(F) 546N(L) 553L 565S 566H(K) 567Y(V) 568F 569R(L) 571A(P) 595N(L) 597Y 619R(H) (identity: 35.7 %/29.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3a7c_A_1 identity=29.0% |
queryA 212:SLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASIN-IDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNM: 310 :* * * * ** * ** * ** * * ** * ** * * * ** * ** : 3a7c_A_1 42:SFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS------------------SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL: 123 SecStr : SS S SS SEEE TTS EE TTSSSS TT EEE TT------------------S EE TTTTTT TT EEE TTS SS TTSSTT : ExpBur :ebeebbeebeeebebbbbbebebeebbeeebeebeebeebebee------------------bebeebeeebbeebeebeebbbbebebeebeeebbeeb: queryA 311:PHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGY-VFQELREDDFQPLMQLPNLSTINLGINFIKQI: 409 : ** * * * * * * * * * * ** * * * * : 3a7c_A_1 124:SSLKYLN-------------------------------LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ: 192 SecStr :TT EEE------------------------------- TT SSS SS S TT TT EEEEEESSS EE TTTTTT EEEEEEEEETT EE TT: ExpBur :eebeebb-------------------------------bbebebeebeeeebbeebeebebbbbbbeeebbebeeebbeebeebeebbbebeebeebeee: queryA 410:DFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRS--TDFEFDPHSNFYHFTRPLIKPQCAAYGKAL-DLSLNS-------IFFIGPN: 499 : * * *** * * * * * * * * * * * * * * * * : 3a7c_A_1 193:SLKSIRDIHHL-TLHLSESAF------LLEIFADILSSVRYLELRDTNLARFQFSPLP-VDEVSSPMKK--LAFRGSVLTDESFNELLKLLRYILELSEV: 282 SecStr :TTTT EEEEE-EEEESS TT------HHHHHHHHTTTEEEEEEES B TT - SSS E--EEEES EEEHHHHHHHHHGGGT TT EE: ExpBur :bbeebeebebb-bbbbeebee------beebbbbbbebbebbbbeebebeebebeebe-eeeeebebeb--bbbbebebbbebebbbbbbbebbeebbeb: queryA 500:QFEN--LPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNI-: 596 : * * * * * * * * * * * ** * * * * * ** * : 3a7c_A_1 283:EFDDCTLNGLGDFNPSESDVVSELGKVETVTI---RRLHIPQFYLFYDLSTVYSLLEKVKRITVE-NSKVFLVP-----CSFSQHLKSLEFLDLSENLMV: 373 SecStr :EEES EEE S STT GGGTT EEEE---ES B S GGGTTTSTT EEEEE-SS -----HHHHHH TT EEE SS : ExpBur :bbbebeeebeeeeeeeeeeeeeebeebebbbb---eeeeeeeeeeeeeeeeebebbeebeebbbb-ebebeebe-----bebbeebeebebbbbbebebe: Contact : b b b b b bbbbb b b b queryA 597:--YTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLD: 694 : * ** ** * * * * ***** ** * * * * * * ** **: 3a7c_A_1 374:EEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE-----ILLTLKNLTSLDISRNTFHPMPDSC--QWPEKMRFLNLSSTGIRVVKTCIPQT---LEVLD: 463 SecStr :HHHHHHHT TTSSTT EEE TTS HHHHHH-----HGGG TT EEE S S -- TT EEE TT S TTS TT--- SEEE: ExpBur :beebeebbbeebbeebeebbbbebebeebeebbe-----bbeebeebebbbbbebebeebeeeb--ebbeebeebbbbebebeebeebbbee---bebbb: Contact : b b queryA 695:LRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDF-RRWMDEH: 790 : * * ** * * * * * * ** * * * ** ** * * ** ** * * * ** : 3a7c_A_1 464:VSNNNL----DSFSLFLPRLQELYISRNKLKTLPDASLFPV--LLVMKIASNQLKSVPDGIFDRLTS--LQKIWLHTNPWDCSCPRIDYLSRWLNKN: 552 SecStr : SS ----S TT EEE SS SS GGG TT-- EEE SS TTGGGGSTT-- EEE S B HHHHHHHHHHHHH : ExpBur :bbebeb----eebebebeebeebebbebebeebbebebbee--bebbbbbebebeebeebbbeebee--beebebeebebebeeeebebbbebbeeb: |