Protein Model on 3a7c_A_1_C_1
(TEMPLATE: 
3a7c
)Protein Model on 3a7c_A_1_C_1
(TEMPLATE: 3a7c
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [549 aa] | Toll-like receptor 2, Variable lymphocyte receptor B :TLR2_MOUSE:Q4G1L2_EPTBU | |
| 2 | b | C 1 (C) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 616S 647S 648L(R) 668E(F) 670H(N) 694D 721H(R) (identity: 42.9 %/29.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:3a7c_A_1 identity=29.0% |
queryA 212:SLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASIN-IDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNM: 310
:* * * * ** * ** * ** * * ** * ** * * * ** * ** :
3a7c_A_1 42:SFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS------------------SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL: 123
SecStr : SS S SS SEEE TTS EE TTSSSS TT EEE TT------------------S EE TTTTTT TT EEE TTS SS TTSSTT :
ExpBur :ebeebbeebeeebebbbbbebebeebbeeebeebeebeebebee------------------bebeebeeebbeebeebeebbbbebebeebeeebbeeb:
queryA 311:PHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGY-VFQELREDDFQPLMQLPNLSTINLGINFIKQI: 409
: ** * * * * * * * * * * ** * * * * :
3a7c_A_1 124:SSLKYLN-------------------------------LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ: 192
SecStr :TT EEE------------------------------- TT SSS SS S TT TT EEEEEESSS EE TTTTTT EEEEEEEEETT EE TT:
ExpBur :eebeebb-------------------------------bbebebeebeeeebbeebeebebbbbbbeeebbebeeebbeebeebeebbbebeebeebeee:
queryA 410:DFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRS--TDFEFDPHSNFYHFTRPLIKPQCAAYGKAL-DLSLNS-------IFFIGPN: 499
: * * *** * * * * * * * * * * * * * * * * :
3a7c_A_1 193:SLKSIRDIHHL-TLHLSESAF------LLEIFADILSSVRYLELRDTNLARFQFSPLP-VDEVSSPMKK--LAFRGSVLTDESFNELLKLLRYILELSEV: 282
SecStr :TTTT EEEEE-EEEESS TT------HHHHHHHHTTTEEEEEEES B TT - SSS E--EEEES EEEHHHHHHHHHGGGT TT EE:
ExpBur :bbeebeebebb-bbbbeebee------beebbbbbbebbebbbbeebebeebebeebe-eeeeebebeb--bbbbebebbbebebbbbbbbebbeebbeb:
queryA 500:QFEN--LPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNI-: 596
: * * * * * * * * * * * ** * * * * * ** * :
3a7c_A_1 283:EFDDCTLNGLGDFNPSESDVVSELGKVETVTI---RRLHIPQFYLFYDLSTVYSLLEKVKRITVE-NSKVFLVP-----CSFSQHLKSLEFLDLSENLMV: 373
SecStr :EEES EEE S STT GGGTT EEEE---ES B S GGGTTTSTT EEEEE-SS -----HHHHHH TT EEE SS :
ExpBur :bbbebeeebeeeeeeeeeeeeeebeebebbbb---eeeeeeeeeeeeeeeeebebbeebeebbbb-ebebeebe-----bebbeebeebebbbbbebebe:
queryA 597:--YTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLD: 694
: * ** ** * * * * ***** ** * * * * * * ** **:
3a7c_A_1 374:EEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE-----ILLTLKNLTSLDISRNTFHPMPDSC--QWPEKMRFLNLSSTGIRVVKTCIPQT---LEVLD: 463
SecStr :HHHHHHHT TTSSTT EEE TTS HHHHHH-----HGGG TT EEE S S -- TT EEE TT S TTS TT--- SEEE:
ExpBur :beebeebbbeebbeebeebbbbebebeebeebbe-----bbeebeebebbbbbebebeebeeeb--ebbeebeebbbbebebeebeebbbee---bebbb:
Contact : b bb b b b
queryA 695:LRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDF-RRWMDEH: 790
: * * ** * * * * * * ** * * * ** ** * * ** ** * * * ** :
3a7c_A_1 464:VSNNNL----DSFSLFLPRLQELYISRNKLKTLPDASLFPV--LLVMKIASNQLKSVPDGIFDRLTS--LQKIWLHTNPWDCSCPRIDYLSRWLNKN: 552
SecStr : SS ----S TT EEE SS SS GGG TT-- EEE SS TTGGGGSTT-- EEE S B HHHHHHHHHHHHH :
ExpBur :bbebeb----eebebebeebeebebbebebeebbebebbee--bebbbbbebebeebeebbbeebee--beebebeebebebeeeebebbbebbeeb:
Contact : b
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[assembly_id:1]
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