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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [550 aa] | Toll-like receptor 2, Variable lymphocyte receptor B :TLR2_MOUSE:Q4G1L2_EPTBU | |
2 | b | B 1 (B) | polymer(polypeptide(L)) [525 aa] | Toll-like receptor 6, Variable lymphocyte receptor B :TLR6_MOUSE:Q4G1L3_EPTBU | 536D(H) 540N(F) 541R(Y) 542L 564N 566H(K) 568F 593H(E) 595N(L) 597Y 600T(N) 617G(Q) 619R(H) 621D(R) (identity: 28.6 %/29.0 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:3a79_A_1 identity=29.0% |
queryA 212:SLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASIN-IDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNM: 310 :* * * * ** * ** * ** * * ** * ** * * * ** * ** : 3a79_A_1 42:SFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS------------------SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL: 123 SecStr : SSS S TT SEEE SS EE SSTTSS TT SEEE TT------------------S EE TTTTTT TT EEE SS S TTSSTT : ExpBur :ebeebbeebeeebebbbbbebebeebbeeebeebeebebbebee------------------bebeebeeebbeebeebeebbbbebebeebeeebbeeb: queryA 311:PHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGY-VFQELREDDFQPLMQLPNLSTINLGINFIKQI: 409 : ** * * * * * * * * * * ** * * * * : 3a79_A_1 124:SSLKYLN-------------------------------LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ: 192 SecStr :TT EEE------------------------------- TT SSS SS SSTT TT EEEEEESSS EE SSTTTT EEEEEEEEETT EE TT: ExpBur :eebebbb-------------------------------bbebebebbeeeebbeebeebebbbbbbeeebbebbeebbeebeebeebbbebbebeebeee: queryA 410:DFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRS--TDFEFDPHSNFYHFTRPLIKPQCAAYGKAL-DLSLNS-------IFFIGPN: 499 : * * *** * * * * * * * * * * * * * * * * : 3a79_A_1 193:SLKSIRDIHHL-TLHLSESAF------LLEIFADILSSVRYLELRDTNLARFQFSPLP-VDEVSSPMKK--LAFRGSVLTDESFNELLKLLRYILELSEV: 282 SecStr :TTTS EEEEE-EEE SBGGG------HHHHHHHTTTTBSEEEEES B TT S- E--EEESS EEEHHHHHHHGGGGGT TT EE: ExpBur :bbeebebbebb-bbbbeeeeb------bbebbbbbbebbebbbbeebebeebebeebe-eeeeebebee--bbbbebebebebebbbbebbeebeebeeb: queryA 500:QFEN--LPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNI-: 596 : * * * * * * * * * * * ** * * * * * ** * : 3a79_A_1 283:EFDDCTLNGLGDFNPSESDVVSELGKVETVTI---RRLHIPQFYLFYDLSTVYSLLEKVKRITVE-NSKVFLVP-----CSFSQHLKSLEFLDLSENLMV: 373 SecStr :EE S EEES S HHHHHHTTTT EEEE---ES B TTGGG GGGTTTTSS EEEEE-SS -----HHHHHH TT EEE TTS : ExpBur :bebebebeebbebebeeebbeeebeebebbbb---eebebeeeeeeeeeeebbebbeebeebbbb-ebebeebb-----bebbeebeebebbbbbebebb: Contact : b bbb b b b b b queryA 597:--YTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLD: 694 : * ** ** * * * * ***** ** * * * * * * ** **: 3a79_A_1 374:EEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE-----ILLTLKNLTSLDISRNTFHPMPDSC--QWPEKMRFLNLSSTGIRVVKTCIPQT---LEVLD: 463 SecStr :HHHHHHHT TTS TT EEE TTS HHHHHH-----HGGG TT EEE S S -- TT EEE TT TTS TT--- SEEE: ExpBur :beebeebbbeebbeebeebbbbebebeebeebbe-----bbeebeebbbbbbbebebeebeeeb--ebbeebeebbbbebebeebeebbbee---bebbb: Contact : bb b b b b queryA 695:LRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDF-RRWMDEH: 790 : * * ** * * * * * * ** * * * ** ** * * ** ** * * * ** : 3a79_A_1 464:VSNNNL----DSFSLFLPRLQELYISRNKLKTLPDASLFPV--LLVMKIASNQLKSVPDGIFDRLTS--LQKIWLHTNPWDCSCPRIDYLSRWLNKN: 552 SecStr : SS ----S TT EEE SS SS TTS TT-- EEE SS S SS TTS TT-- EEE S TTT HHHHHHHHHT: ExpBur :bbebeb----eebebebeebeebebbebebeebbebebbee--bebbebbebebeebeeebbeebee--beebbbeebebeeeeeebebbbebbeee: |