Protein Model on 2z81_A_1_C_1
(TEMPLATE: 
2z81
)Protein Model on 2z81_A_1_C_1
(TEMPLATE: 2z81
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [549 aa] | Toll-like receptor 2, Variable lymphocyte receptor B :TLR2_MOUSE:Q4G1L2_EPTBU | |
| 2 | b | C 1 (C) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 647S 648L(R) 668E(F) 670H(N) 694D 716T(E) 721H(R) (identity: 28.6 %/29.0 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:2z81_A_1 identity=29.0% |
queryA 212:SLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASIN-IDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNM: 310
:* * * * ** * ** * ** * * ** * ** * * * ** * ** :
2z81_A_1 16:SFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKS------------------SRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPL: 97
SecStr : SS S TT EEE SS EE SSTTSS TT EEE TT------------------S EE TTTTTT TT EEE TTS S HHHHTT :
ExpBur :ebeebbeebeeebebbbbbebebeebbeeebeebeebeebebee------------------bebeebeeebbeebeebeebbbbebebeebeeebbeeb:
queryA 311:PHLKVLDLEFNYLVGEIASGAFLTMLPRLEILDLSFNYIKGSYPQHINISRNFSKLLSLRALHLRGY-VFQELREDDFQPLMQLPNLSTINLGINFIKQI: 409
: ** * * * * * * * * * * ** * * * * :
2z81_A_1 98:SSLKYLN-------------------------------LMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQ: 166
SecStr :TT EEE------------------------------- TT SSS SS S TT TT EEEEEESSS EE TTTTTT EEEEEEEEETT EE TT:
ExpBur :eebeebb-------------------------------bbebebeebeeeebbeebeebebbbbbbeeebbebeeebbeebeebeebbbebbebeebeee:
queryA 410:DFKLFQNFSNLEIIYLSENRISPLVKDTRQSYANSSSFQRHIRKRRS--TDFEFDPHSNFYHFTRPLIKPQCAAYGKAL-DLSLNS-------IFFIGPN: 499
: * * *** * * * * * * * * * * * * * * * * :
2z81_A_1 167:SLKSIRDIHHL-TLHLSESAF------LLEIFADILSSVRYLELRDTNLARFQFSPLP-VDEVSSPMKK--LAFRGSVLTDESFNELLKLLRYILELSEV: 256
SecStr :TTTT SEEEEE-EEE SBSTT------HHHHHHHSTTTBSEEEEES B TT S-S E--EEEES EEEHHHHHHHHGGGGG TT EE:
ExpBur :bbeebeebebb-bbbbeebeb------beebbbbbbebbebbbbeebebeebebeebe-eeeeebebee--bbbbebebbbebebbbbbbbeebeebeeb:
queryA 500:QFEN--LPDIACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNI-: 596
: * * * * * * * * * * * ** * * * * * ** * :
2z81_A_1 257:EFDDCTLNGLGDFNPSESDVVSELGKVETVTI---RRLHIPQFYLFYDLSTVYSLLEKVKRITVE-NSKVFLVP-----CSFSQHLKSLEFLDLSENLMV: 347
SecStr :EEES EEE S TTT TT EEEE---ES B S GGGS HHHHHSTT EEEEE-SS -----HHHHHH TT EEE SS :
ExpBur :bbbebebebeeebebeeeebbeebeebebbbb---eeeeeeeeeebeeeebebebbeebeebbbb-ebebeebe-----bebbeebeebebbbbbebebe:
queryA 597:--YTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLD: 694
: * ** ** * * * * ***** ** * * * * * * ** **:
2z81_A_1 348:EEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGE-----ILLTLKNLTSLDISRNTFHPMPDSC--QWPEKMRFLNLSSTGIRVVKTCIPQT---LEVLD: 437
SecStr :HHHHHHHT TTSSTT EEE TTS HHHHHH-----HGGG TT EEE TT S -- TT EEE TTS S TTS TT--- SEEE:
ExpBur :beebeebbbeebbeebeebbbbebebeebeebbe-----bbeebeebebbbbbebebeebeeeb--ebbeebeebbbbebebeebeebbbee---bebbb:
Contact : bb b b b
queryA 695:LRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDF-RRWMDEH: 790
: * * ** * * * * * * ** * * * * * ** * * ** ** * * * ** :
2z81_A_1 438:VSNNNL----DSFSLFLPRLQELYISRNKLKTLPDASLFPV--LLVMKISRNQLKSVPDGIFDRLTS--LQKIWLHTNPWDCSCPRIDYLSRWLNKN: 526
SecStr : SS ----S TT EEE SS SS GGG TT-- EEE SS TTGGGG TT-- EEE SS B HHHHHHHHHHHHH :
ExpBur :bbebeb----eebebebeebeebebbebebeebbebebbee--bebbebbebebeebeebbbeebee--beebebeebebebeeeebebbbebbeeb:
Contact : b b
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[assembly_id:1]
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