[pdbjlvh2]Protein Model on 2z66_A_1_U

Protein Model on 2z66_A_1_U_1 (TEMPLATE: 2z66 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [306 aa]	Variable lymphocyte receptor B, Toll-like receptor 4 :Q4G1L2_EPTBU:TLR4_HUMAN
2	b		U 1 (A)	non-polymer(SO4)	SULFATE ION	750T 779D(E) 780I(H) 781G(Q) 782D(S) 783F (identity: 33.3 %/30.0 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2z66_A_1 identity=30.0%

queryA       508:ACLNLSANSNAQVLSGTEFSAIPHVKYLDLTNNRLDFDNASALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLES: 607
                : *       *   *             * *  * *          *  *  * ** *   *   *      *    * ** * ** *   *      *  :
2z66_A_1       6:SCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFK--GCCSQSDF--GTTSLKYLDLSFNGVITMSSNF-LGL: 100
SecStr          :EEETTEEE  SS  SS  S   TT  EEE  SS      TTTTTT TT SEEE  SS   EE--EEEEHHHH--S S   EEE  S SEEEEEEEE-ET :    
ExpBur          :eeeeeebebeeeebeebbeebeeebeebbbeebebeebeeeebeebeebebbbbbebebebe--ebbbeeeb--bbeebeebbbbebeebebeeeb-ebb:    

queryA       608:KSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKF-FNWTLLQQFPRLELLDLRGNKLLFLTDS: 706
                :  *  * *    *            * *  * **  ** *        *  *  *  **  *    *     *          *  ***    *  *   :
2z66_A_1     101:EQLEHLDFQHSNLKQMSE------FSVFLSLRNLIYLDISHTHTRVAFNGIFNGL-SSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT: 193
SecStr          :TT  EEE TTSEEESSTT------TTTTTT TT  EEE TTS  EE STTTTTT -TT  EEE TT EEGGGEE S  TT TT  EEE TTS   EE TT:    
ExpBur          :eebebbbbeebebeebbe------ebbbeebeebebbbbbebebebeeebbbebb-eebebbebbebbbeeeebbebbeebeebeebbbbebebeebbee:    

queryA       707:LSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWMDE--HLNVKIPRLVDVICA: 804
                :     ***  *  ***    *         **  ** * *   *  *  *       *  * *  * * ***    *  *      * *   *     **:
2z66_A_1     194:AFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ-HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERME---CA: 289
SecStr          :TTTT TT  EEE TTS  SB  SGGGTT TT  EEE TTS   B SSSS  -   TT  EEE TT  EE SGGGHHHHHHHHHTGGGBS GGG B---EE:    
ExpBur          :bbebbeebeebbbbebebebbbbebbeebeebeebbbbebebeebeeeebe-ebbeebeebbbbebebbbeeeeeebbebbeebeebbeeeeebe---be:    
Contact         :                                           b                            bbbbb                       

queryA       805:SPGDQRGKSIVSLELT: 820
                : * *  *    **  *:
2z66_A_1     290:TPSDKQGMPVLSLNIT: 305
SecStr          :ESGGGTT BGGG    :    
ExpBur          :eeeeeeeeebbebebe:

Protein Model on 2z66_A_1_U_1 (TEMPLATE: 2z66 )

Input Residue Numbers for Focused Sites