Protein Model on 2j67_A_1_B_1 (TEMPLATE: 2j67 )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [141 aa] TOLL LIKE RECEPTOR 10 :TLR10_HUMAN
2 b B 1 (B) polymer(polypeptide(L)) [134 aa] TOLL LIKE RECEPTOR 10 :TLR10_HUMAN 918E(Y) 919E 922W(F) 924P 926L(K) 927A(S) 928I 929I(S) 953S(N) 954W(E) 956F(C) 957K(H) 988Q(R) (identity: 23.1 %/36.0 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2j67_A_1 identity=36.0%
queryA       880:YDAYISYDTKDASVTDWVINELRYHLEESRDKNVLLCLEERDWDPGLAIIDNLMQSINQSKKTVFVLTKKYAKSWNFKTAFYLALQRLMDENMDVIIFIL: 979
                :  * ***   *     ** ***   **   *   * ** *   ***  *  *    *  * *  ***             ** *           ** **:
2j67_A_1      36:FHAFISYSEHDSL---WVKNELIPNLEKE-DXSILICLYESYFDPGKSISENIVSFIEKSYKSIFVLSPNFVQNEWCHYEFYFAHHNXXXXXXXHIILIL: 131
SecStr          :EEEEEE  GGGHH---HHHHTHHHHHTT - -   EEEHHHH  TTS HHHHHHHHHHTEEEEEEEE HHHHHHTGGGTHHHHTT  ------- EEEEE:    
ExpBur          :bebbbbbbeebbe---bbeeebbeebeee-e-ebebbbeeeeeeeeeeeeebbebbbeebebbbbbbbeebbeeebeebeebbeeee-------eebbbb:    
Contact         :                                      bb  b b bbbb                       bb bb                      

queryA       980:LEPVLQH---SQYLRLRQRICKSSILQWPDNPKAEGLFWQTLRNVV:1022
                :***         *  *     *   * **      ****  **   :
2j67_A_1     132:LEPIPFYCIPTRYHKLKALLEKKAYLEWPKDRRKCGLFWANLRAAI: 177
SecStr          :SS   GGGS TT HHHHHHHHTT SEE  SSGGGHHHHHHHHHHHH:    
ExpBur          :beebeeeebeeebeebeeebeeeeeeebbeeeeebeebbeebeeeb:    
Contact         :           b                                                                                        


Input Residue Numbers for Focused Sites

ex) 2,15,123