[pdbjlvh2]Protein Model on 2id5_A_1_G

Protein Model on 2id5_A_1_G_1 (TEMPLATE: 2id5 )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES						contact sites
model	mark	query	asym_id oper (auth_asym_id)	type	description	a(query A)
1	a	A(TLR8_HUMAN)	A 1 (A)	polymer(polypeptide(L)) [470 aa]	Leucine rich repeat neuronal 6A :Q96FE5_HUMAN
2	b		G 1 (G)	branched(oligosaccharide)	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose	271D(N) (identity: 0.0 %/31.9 %)

ALIGNMENTS

MODEL[1] Protein A "queryA" TEMPLATE:2id5_A_1 identity=31.9%

queryA        36:CDEKKQNDSVIAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDN: 135
                :*    *   *   *   *   **         ***  * *       *     *    ** *           * *       *** ** *** * *  *:
2id5_A_1       7:CECSAQDRAVL--CHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNEN-----------IVSA---VEPGAFNNLFNLRTLGLRSN:  90
SecStr          : EEETTTTEEE--  S   SS  S   TT SEEE  SS   EE TTTTTT TT  EEE TTS-----------   E---E TTTTTT TT  EEE  SS:    
ExpBur          :beeeeeeebbe--beeeebeebbeebbeebeebbbbebebeebeeeebeebeebeebbbbeb-----------ebee---beebbbeebeebebbbbebb:    

queryA       136:QLPQIPSGL---PESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLF---L: 229
                : *  ** *       ** *    * *          * *** *    *           *    *  *  ** * *    *   *    * *  *    *:
2id5_A_1      91:RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDN-------DLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRL: 183
SecStr          :   S  TTSSTT TT  EEE TTS   EE TTTTTT TT  EEEE  T-------T  EE TTSSTT TT  EEEEES   SS  HHHHTT TT  EEEE:    
ExpBur          :ebeebeeebbeebeebbebbbbebebeebeeebbeebeebebbebbbe-------ebeebbeebbbbbeebeebbbbebebeebbeebbbebeebebbeb:    

queryA       230:SNTQIKYISEEDFKGLINLTLLDLS---------GNCPRCFN-APFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMPHLKVLDLE: 319
                :    *  *    ** *  *  *  *          **    *        *   *       *   *  ** ****      *          *     *:
2id5_A_1     184:RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTA---VPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQ----E: 276
SecStr          :ES    EE TT S S TT  EEEEE  TT  EE TTTTTT   SEEEEESS   S---  HHHHTT TT  EEE  SS   EE TTS TT TT  ----E:    
ExpBur          :eebebebbeeebbeebeebeebbbbebeebeebbeebbeebebbebbbbebebee---bbbebbeebeebeebebbebebeebeeeebeebeebe----e:    
Contact         :                           bb                      b                                                

queryA       320:FNYLVGEIA: 328
                :     *  *:
2id5_A_1     277:IQLVGGQLA: 285
SecStr          :EE  SS  S:    
ExpBur          :bbbbebebe:

Protein Model on 2id5_A_1_G_1 (TEMPLATE: 2id5 )

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