Protein Model on 2a0z_A_1_M_1 (TEMPLATE: 2a0z )

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ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

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MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)		 type description a(query A)
1 a A(TLR8_HUMAN) A 1 (A) polymer(polypeptide(L)) [671 aa] Toll-like receptor 3 :TLR3_HUMAN
2 b M 1 (A) non-polymer(GLC) alpha-D-glucopyranose 452R(T) 487D 489S(G) 511N(Y) 513S (identity: 40.0 %/30.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:2a0z_A_1 identity=30.7%
queryA        46:IAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDNQLPQIPS---: 142
                : * **   *  **       * * *  *         *     **      *         *                *  *  * *  * * *      :
2a0z_A_1      13:VADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLE---PELCQK-----------LPMLKVLNLQHNELSQLSDKTF:  98
SecStr          :EEE  SS  SS  SSS TT SEEE  SS      GGGGTT TT SEEE  SS      ---TTHHHH----------- TT  EEE  SS      TTTT:    
ExpBur          :ebebeeeeeeebbeebeeebeebebbebebeebebeebeebeebebbebbebebeebe---eebbee-----------beebeebbbeebebeebeeebb:    

queryA       143:GLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFN-KVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEED: 241
                :     **** *  * *  *         **  * *  *     *       *      * *     *    *        *** ** **  ***  *   :
2a0z_A_1      99:AFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFAN---SSLKKLELSSNQIKEFSPGC: 195
SecStr          :TT TT SEEE TTS      S TTTT TT  EEE  SS        SSS  TT  EEE  SS    B GGGTGGGTT--- EESEEE  S     B TTT:    
ExpBur          :eebeebeebbbbebebeebeebbbeebeebebbbbbebebeebebbeeebbeebeebbbbebebeebeeebbebbee---bebeebbbbebebeebeeeb:    

queryA       242:FKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMP--HLKVLDLEFNYLVGEIASGAFLTMLPRL: 339
                :*     *  * *                   * *           *  * * **   *       *       *  ***  * *            ** *:
2a0z_A_1     196:FHAIGRLFGLFLNN--------------VQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL--NVVGNDSFAWLPQL: 279
SecStr          :TTTSSEE EEE TT--------------    HHHHHHHHHHTTTS   EEE TTS   EE TTTTGGGGGS   EEE TTS  -- EE TTTTTT TT :    
ExpBur          :bebbeebbbbebbe--------------bebbeebbeebbebbbebebeebbbbebebeebeeebbebbeebebebbbbbebeb--eebbeebbeebeeb:    

queryA       340:EILDLSFNYIKGSYPQHINISRNFSKLLSLRALHL-RGYVFQEL------REDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS-: 431
                :*   *  * *     **   *     *   * * * *    *          ***     *  *   *   * *  *    *    **    **    * :
2a0z_A_1     280:EYFFLEYNNI-----QHL-FSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFS-FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL: 372
SecStr          : EEE  S  B----- EE- TTTTTT TT  EEE TT B    SSS    EE TTT-TTT TT  EEE  S  B    TTSSTT TT  EEE TT BS  :    
ExpBur          :eebebbebeb-----eeb-eeebbebbebbeebbbeebbbeeeeeeeeebebeeeb-beebeebeebbbbbbebeebeeebbeebeebeebbbbebbeeb:    

queryA       432:-PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIFF-IGPNQFENLPDIACLNLSANSNAQVLSGTEFSAI: 529
                :  *   *  * * *        *      * *  *   *                *** ** *           *  *    ** *   * *    *   :
2a0z_A_1     373:RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHL-------------EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ-LTRNSFALV: 458
SecStr          : EE SSTTGGGTTS   EEE  SS   EE TTTTTT TT ------------- EEE  SS  EEE  SGGGTT TT  EEE  S SEEE-  TTTTTT :    
ExpBur          :eebeeebbebbeebebeebebbebebeebeeebbeebeeb-------------eebebbebebebebebebbeebeebebbebbebeebe-beeebbeeb:    
Contact         :                     b                                  b b                      b b                

queryA       530:PHVKYLDLTNNRLDFDNA----SALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWN: 625
                :*    * *   *    *     *    *  *  **** *            **       *  * * ***   *    *                     :
2a0z_A_1     459:PSLQRLML--RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE------KLEILDLQHNNLARLWKHAN---------------------: 529
SecStr          :TT  EEE -- SS  B TT SS TTTT TT  EEE  SS      TTTTTT T------T  EEE  SS  GGGGSTTS---------------------:    
ExpBur          :eebeebbb--eebebeebeeeebbbeebeebbbbbbbebebeebeeebbebbe------ebeebbbbebebeebbeeeb---------------------:    

queryA       626:DDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRIS: 725
                :      *   ***  *  * *  *    ** * *      * ** * *                                             *  *   :
2a0z_A_1     530:--PGGPIYFLKGLSHLHILNLESNGFDEIPVEVF----KDLFELKIID---------------------------------------------LGLNNLN: 578
SecStr          :--TT    TTTT TT  EEE  SS      TTTT----TT TT  EEE---------------------------------------------  SS   :    
ExpBur          :--eeeebebbeebeebeebbbeebebeebbeebb----eebeebeebb---------------------------------------------bbebebe:    

queryA       726:HLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCD-IGDFRRWMDEHLNVKIPRLVD-VICASPGDQRGKSIVSLELTTC: 822
                : **        *** * *  **     *          *  *    *** ***  *  *  *  *     ** *     *  *    *          *:
2a0z_A_1     579:TLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMRFNPFDCTCESIAWFVNWINE-THTNIPELSSHYLCNTPPHYHGFPVRLFDTSSC: 675
SecStr          :   TTTTTT TT  EEE TTS      HHHH-HHHHTT SEEE  S  EE SHHHHHHHHHHHHH-  SB TTHHHH BEEESTTSTT BGGG   TT :    
ExpBur          :ebeeebbeebeebeebbbbebebeebeeebb-eebbeebeebbbbebebbbeeebbbebbebbee-eebebeebeeebebeeeeeeeeeebeebeeeee:

Input Residue Numbers for Focused Sites

ex) 2,15,123