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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [629 aa] | Toll-like receptor 3 :TLR3_HUMAN | |
2 | b | P 1 (A) | non-polymer(GOL) | GLYCEROL | 536D(M) 558V(I) 560D 588V(I) 590N(D) 592S(Q) (identity: 16.7 %/31.2 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1ziw_A_1 identity=31.2% |
queryA 46:IAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDNQLPQIPS---: 142 : * ** * ** * * * * * ** * * * * * * * * * : 1ziw_A_1 8:VADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLE---PELCQK-----------LPMLKVLNLQHNELSQLSDKTF: 93 SecStr :EEE SS SS S S TT SEEE SS GGGGGGGTT SEEE SS ---TTHHHH----------- TT EEE SS TTTT: ExpBur :ebebbeeeeeebbeebeeebeebebbebebeebebeebeebeebebbebbebebeebe---eebbee-----------beebeebbbeebebeebeeebb: queryA 143:GLPESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFN-KVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEED: 241 : **** * * * * ** * * * * * * * * * *** ** ** *** * : 1ziw_A_1 94:AFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFAN---SSLKKLELSSNQIKEFSPGC: 190 SecStr :TT TT SEEE SS S TTTT TT EEE SS S SSS TT EEE SS B HHHHGGGTT--- EESEEE TT B TTG: ExpBur :eebeebeebbbbebebeebeebbbeebeebebbbbbebbbebbebbeeebbeebeebbbbebebebbeeebbebbee---bebeebbbbebebeebeeeb: queryA 242:FKGLINLTLLDLSGNCPRCFNAPFPCVPCDGGASINIDRFAFQNLTQLRYLNLSSTSLRKINAAWFKNMP--HLKVLDLEFNYLVGEIASGAFLTMLPRL: 339 :* * * * * * * * * ** * * * *** * * ** *: 1ziw_A_1 191:FHAIGRLFGLFLNN--------------VQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNL--NVVGNDSFAWLPQL: 274 SecStr :GGGSSEE EEE TT-------------- HHHHHHHHHHHHTTS EEE TTS EE TTTTGGGGGS EEE TTS -- EE TTTTTT TT : ExpBur :bebbeebebbbbbe--------------bebbeebbeebbebbbebebeebbbbebebeebeeebbebbeebebbbbbbbebeb--eebbeebbeebeeb: queryA 340:EILDLSFNYIKGSYPQHINISRNFSKLLSLRALHL-RGYVFQEL------REDDFQPLMQLPNLSTINLGINFIKQIDFKLFQNFSNLEIIYLSENRIS-: 431 :* * * * ** * * * * * * * *** * * * * * * * ** ** * : 1ziw_A_1 275:EYFFLEYNNI-----QHL-FSHSLHGLFNVRYLNLKRSFTKQXXXXXXLPKIDDFS-FQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSL: 367 SecStr : EEE S B-----SEE- TTTTTT TT EEE TT B ------ EE TTT-TTT TT EEE S B TTTTTT TT EEE TT BS : ExpBur :eebebbebeb-----eeb-eeebbebbeebeebbbeebbbee------ebebeeeb-bebbebbeebbbebbebeebeeebbebbeebeebbbbebbeeb: queryA 432:-PLVKDTRQSYANSSSFQRHIRKRRSTDFEFDPHSNFYHFTRPLIKPQCAAYGKALDLSLNSIF-FIGPNQFENLPDIACLNLSANSNAQVLSGTEFSAI: 529 : * * * * * * * * * * *** ** * * * ** * * * * : 1ziw_A_1 368:RTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHL-------------EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQ-LTRNSFALV: 453 SecStr : EE TTTTGGGTTS EEE TTS EE TTTTTT TT ------------- EEE SS EEE SGGGTT TT EEE S SEEE- TTTTTT : ExpBur :eebeeebbebbeebebeebbbbebebbebeeebbeebbeb-------------eebebbebebebebebebbeebeebebbebbebeebe-bbeebbeeb: queryA 530:PHVKYLDLTNNRLDFDNA----SALTELSDLEVLDLSYNSHYFRIAGVTHHLEFIQNFTNLKVLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWN: 625 :* * * * * * * * **** * ** * * * *** * * : 1ziw_A_1 454:PSLQRLML--RRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLE------KLEILDLQHNNLARLWKHAN---------------------: 524 SecStr :TT EEE --TTS B TT SS TTTT TT EEE SS TTTTTT T------T EEE SS GGGGSTTS---------------------: ExpBur :eebeebbb--eebebeebebeebbbeebeebbbbbbbbbebeebeeebbebbe------ebeebbbbebebeebbeeeb---------------------: Contact : b b b b b b queryA 626:DDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRIS: 725 : * *** * * * * ** * * * ** * * * * : 1ziw_A_1 525:--PGGPIYFLKGLSHLHILNLESNGFDEIPVEVF----KDLFELKIID---------------------------------------------LGLNNLN: 573 SecStr :--TTS TTTT TT EEE SS TTTT----TT TT EEE--------------------------------------------- SS : ExpBur :--eeeebebbeebeebbebbbbbbebeebbeebb----eebeebeebb---------------------------------------------bbebebe: queryA 726:HLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCD-IGDFRRWMDE: 789 : ** *** * * ** * * * *** *** * * * *: 1ziw_A_1 574:TLPASVFNNQVSLKSLNLQKNLITSVEKKVF-GPAFRNLTELDMRFNPFDCTCESIAWFVNWINE: 637 SecStr : TTTTTT TT EEE TTS B HHHH-HHHHTT SEEE TT B SSEE SS : ExpBur :ebeeebbeebeebebbbbbebebeebeeebb-eebeeebeebbbeebeeeeeeeeeeeeeebeee: |