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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [305 aa] | Decorin :PGS2_BOVIN | |
2 | b | C 1 (C) | branched(oligosaccharide) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 180N 181C(P) 210F(D) 212S(N) (identity: 25.0 %/32.3 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1xec_A_1 identity=32.3% |
queryA 46:IAECSNRRLQEVPQTVGKYVTELDLSDNFITHITNESFQGLQNLTKINLNHNPNVQHQNGNPGIQSNGLNITDGAFLNLKNLRELLLEDNQLPQIPSGLP: 145 : ** * ** *** * ** * * * ** * * * *** * * * * *** * *: 1xec_A_1 35:VVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLIL--------------INNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMP: 120 SecStr :EEE TTS SS S TT EEE SS EE TTTTTT TT EEE -------------- SS EE TTSSTT TT EEE SS SB SS : ExpBur :ebebbebebeebbeebbeebbebbbeebebeebeeebbeebeebebbbb--------------bebebeebbebbbeebeebeebbbbebebeebbeebb: queryA 146:ESLTELSLIQNNIYNITKEGISRLINLKNLYLAWNCYFNKVCEKTNIEDGVFETLTNLELLSLSFNSLSHVPPKLPSSLRKLFLSNTQIKYISEEDFKGL: 245 : * ** * * * * * * ** * * * * ** ** * * * ***: 1xec_A_1 121:KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL-----KSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGL: 215 SecStr :TT EEE SS BB GGGTTT TT EEE SS ----- GGGB TTTTTT TT EEE SS S SS TT SEEE TTS EE TTTTTT : ExpBur :eebebbebeebebeebeeebbeebeebeebbbbebeb-----eeebbeebbbebbeebeebebbebebeebbeebbeebeebbbeebebeebbeebbeeb: Contact : bb b b queryA 246:INLTLLDLSGNCPRCFNAPFPCVPCDGGASIN-IDRFAFQNLTQLRYLNLSSTSLRKINAA: 305 : ** * ** * ** * * ** * * * * : 1xec_A_1 216:NNLAKLGLSFN------------------SISAVDNGSLANTPHLRELHLNNNKLVKVPGG: 258 SecStr :TT EEE SS------------------ EE TTTGGGSTT EEE SS SS TT: ExpBur :eebbebbbbeb------------------ebeebeeebbebbeebeebebbebebeebbee: |