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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | D 1 (D) | polymer(polypeptide(L)) [265 aa] | Platelet glycoprotein Ib :GP1BA_HUMAN | |
2 | b | C 1 (C) | polymer(polypeptide(L)) [125 aa] | Botrocetin :BOTB_BOTJA | 784R 785R 788D(Q) 789E(D) (identity: 50.0 %/35.4 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1u0n_D_1 identity=35.4% |
queryA 588:VLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNEAFLNLPASLTELHINDNMLKFFNWTLLQQF: 687 : * ** * ** * * * * * * * **** * * * *** ** * * * * : 1u0n_D_1 35:ILHLSENLLYTFSLATLMPYTRLTQLNLDRCELTKLQVDGT---------LPVLGTLDLSHNQLQSLPLLG-QTLPA-LTVLDVSFNRLTSLPLGALRGL: 123 SecStr :EEE SS SEEEGGGGTT TT EEE SS EEE S --------- SS EEE SS SS T-TT SS- EEE SS TTSSTT : ExpBur :bbbbbebebeebebeebeebeebeebbbbebebeebeeeee---------beebbebbbbebebeebbebb-ebbee-bebbebbebebeebeeebbeeb: queryA 688:PRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALETKTTTKLSMLELHGNPFECTCDIGDFRRWM: 787 : * * * ** * * * * * * * * ** * * * * * * * ** * * ***** * * * **** : 1u0n_D_1 124:GELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNQLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHL---LPFAFLHGNPWLCNCEILYFRRWL: 220 SecStr : S EEE SS S SS SSS S EEE SS TTSSTT S EEE SS TT STT --- SEEE S SSSTTHHHHHH: ExpBur :eebeebebbebebeebbeebbeebeebeebbbbebebeebbeebbeebeebebbbbbebebebbeeebbeeee---beebbbbbbebebeeebebbeebb: Contact : bb queryA 788:DEH: 790 : : 1u0n_D_1 221:QDN: 223 SecStr :HH : ExpBur :eeb: Contact :bb |