Protein Model on 1qyy_A_1_C_1
(TEMPLATE: 
1qyy
)Protein Model on 1qyy_A_1_C_1
(TEMPLATE: 1qyy
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ALL MOLECULES IN THE BIOLOGICAL UNIT: |
| MOLECULES | contact sites | |||||
| model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
| 1 | a | A(TLR8_HUMAN) | A 1 (A) | polymer(polypeptide(L)) [266 aa] | Platelet glycoprotein Ib alpha chain :GPBA_HUMAN | |
| 2 | b | C 1 (B) | branched(oligosaccharide) | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | 699K(E) 701L(K) 722N 723R(N) (identity: 25.0 %/35.6 %) | |
| ALIGNMENTS |
| MODEL[1] Protein A "queryA" TEMPLATE:1qyy_A_1 identity=35.6% |
queryA 569:RIAGVTHHLEF---IQNFTNLK--------VLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNE: 657
: * *** * * * * ** * ** * * * * * * * **** * * * :
1qyy_A_1 5:EVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGT---------LPVLGTLDLSHNQLQSLPLL: 95
SecStr :EE SSSSEEEE SS SS TT TTEEEEE SS SEEEGGGGTT TT EEE TTS EEE S --------- TT EEE SS SS :
ExpBur :ebeeeeeebebebbeeebeebbeebbeebbbbbbbebebeebbbbebeebeebeebbbbebebeebeeeee---------beebbebbbbebebeebbeb:
queryA 658:AFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALE: 757
: *** ** * * * * * * * ** * * * * * * * * ** * * * * * * * ** * :
1qyy_A_1 96:G-QTLPA-LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFG: 193
SecStr :T-TT TT- EEE SS S TTTTTT TT EEE TTS TTTTTT TT EEE SS TTTTTT SS EEE SS TTSST:
ExpBur :b-ebbee-bebbbbbebebeebeeebbeebeebeebebbbbebeebbeebbeebeebeebbbbebebeebeeebbeebeebebbbbbebebeebeeebbe:
Contact : b b bb
queryA 758:TKTTTKLSMLELHGNPFECTCDIGDFRRWMDEH: 790
: * ***** * * * **** :
1qyy_A_1 194:SHL---LPFAFLHGNPWLCNCEILYFRRWLQDN: 223
SecStr :TS --- SEEE S SGGGHHHHHHHHHT:
ExpBur :eee---beebbbbbbebebeeebbebeebbeeb:
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[assembly_id:1]
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