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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(TLR8_HUMAN) | D 1 (G) | polymer(polypeptide(L)) [284 aa] | Platelet glycoprotein Ib alpha chain precursor :GPBA_HUMAN | |
2 | b | G 1 (G) | non-polymer(NAG) | 2-acetamido-2-deoxy-beta-D-glucopyranose | 699K(E) 701L(K) 723R(N) (identity: 0.0 %/35.6 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:1ook_D_1 identity=35.6% |
queryA 569:RIAGVTHHLEF---IQNFTNLK--------VLNLSHNNIYTLTDKYNLESKSLVELVFSGNRLDILWNDDDNRYISIFKGLKNLTRLDLSLNRLKHIPNE: 657 : * *** * * * * ** * ** * * * * * * * **** * * * : 1ook_D_1 5:EVSKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGT---------LPVLGTLDLSHNQLQSLPLL: 95 SecStr :EEEEETTEEEEE TTS SS S TTEEEEE TTS SEEEGGGGSS TT EEE TTS SEEE S --------- TT EEE SS SS : ExpBur :ebeeeeeebebebeeeebeeebeebeeebbbbbbbebebeebbbeebeebeebeebbbbebebeebeeebe---------beebbebbbbebebeebbeb: queryA 658:AFLNLPASLTELHINDNMLKFFNWTLLQQFPRLELLDLRGNKLLFLTDSLSDFTSSLRTLLLSHNRISHLPSGFLSEVSSLKHLDLSSNLLKTINKSALE: 757 : *** ** * * * * * * * ** * * * * * * * * ** * * * * * * * ** * : 1ook_D_1 96:G-QTLPA-LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFG: 193 SecStr :T-TT TT- EEE SS SS TTTTTT TT EEE TTS TTTTTT TT EEE SS S TTTTSS TT EEE SS TTSST: ExpBur :b-ebbee-bebbebbebebeebeeebbeebeebebbebbebebeebbeebbeebeebeebbbbebebeebbeebbeebeebebbbbbebebeebeeebbe: Contact : b b b queryA 758:TKTTTKLSMLELHGNPFECTCDIGDFRRWMDEH: 790 : * ***** * * * **** : 1ook_D_1 194:SHL---LPFAFLHGNPWLCNCEILYFRRWLQDN: 223 SecStr :T --- SEEE SS B SSTTHHHHHHHHHT: ExpBur :eee---beebbbbbbebebeeebbbbbbbbeeb: |