Protein Model on 7lbx_B_1_J_1 (TEMPLATE: 7lbx )

CurrentView:HTML5 Change to:[JAVA] DOWNLOAD:
[sequence-replaced 3D model] [for PyMOL]
[3D template]
[Modeller script]

ALL MOLECULES IN THE BIOLOGICAL UNIT:
[assembly_id:1]

Window size :
[small] [medium] [large]

[help]


MOLECULES contact sites
model mark query asym_id oper
(auth_asym_id)
type description a(query A)
1 a A(HMGB1_HUMAN) B 1 (B) polymer(polypeptide(L)) [189 aa] Transcription factor A, mitochondrial :TFAM_HUMAN
2 b J 1 (B) non-polymer(EDO) 1,2-ETHANEDIOL 68K(W) 72E(K) (identity: 0.0 %/29.7 %)
ALIGNMENTS
MODEL[1] Protein A "queryA" TEMPLATE:7lbx_B_1 identity=29.7%
queryA         6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET:  85
                :****    ***  *        *   ***     *       **       *    *   *    *  *         *                 *  *:
7lbx_B_1       8:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 102
SecStr          :    ---  HHHHHHHHHHHHHHHHSTTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH  HHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeb---eeeeebbbeebeeebeeeeeebee--eebeeebbeebeeeeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeebeeeeeeeeeeee:    
Contact         :                                                              b   b                                 

queryA        86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162
                :***       **** **      *     **  *        *   * * *     *  *   *      *       :
7lbx_B_1     103:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 176
SecStr          :HHHHHHHTT       HHHHHHHHHTTTS  SSH----HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHH:    
ExpBur          :eeeeeeeeeebeeeeebeebbbeeeeeebeeeee----eeeeeebeeeeeebeeeeeeebeeebeeeeeebeeebeeb:    


Input Residue Numbers for Focused Sites

ex) 2,15,123