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DOWNLOAD: [sequence-replaced 3D model] [for PyMOL] [3D template] [Modeller script]
ALL MOLECULES IN THE BIOLOGICAL UNIT: |
MOLECULES | contact sites | |||||
model | mark | query | asym_id oper (auth_asym_id) |
type | description | a(query A) |
1 | a | A(HMGB1_HUMAN) | B 1 (B) | polymer(polypeptide(L)) [189 aa] | Transcription factor A, mitochondrial :TFAM_HUMAN | |
2 | b | J 1 (B) | non-polymer(EDO) | 1,2-ETHANEDIOL | 68K(W) 72E(K) (identity: 0.0 %/29.7 %) |
ALIGNMENTS |
MODEL[1] Protein A "queryA" TEMPLATE:7lbx_B_1 identity=29.7% |
queryA 6:PKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREMKTY---IPP-----------------KGET: 85 :**** *** * * *** * ** * * * * * * * *: 7lbx_B_1 8:PKKP---VSSYLRFSKEQLPIFKAQNPDAKT--TELIRRIAQRWRELPDSKKKIYQDAYRAEWQVYKEEISRFKEQLTPSQIMSLEKEIMDKHLKRKAMT: 102 SecStr : --- HHHHHHHHHHHHHHHHSTTS H--HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeeb---eeeeebbbeebeeebeeeeeebee--eebeeebbeebeeeeeeebeeeeeeeeeeeeebeeebeebeeebeeeeeeebeebeeeeeeeeeeee: Contact : b b queryA 86:KKK-FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAY: 162 :*** **** ** * ** * * * * * * * * * : 7lbx_B_1 103:KKKELTLLGKPKRPRSAYNVYVAERFQEAKGDSP----QEKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKSW: 176 SecStr :HHHHHHHTT HHHHHHHHHTTTS SSH----HHHHHHHHHHHHHS HHHHHHHHHHHHHHHHHHHHHHHHH: ExpBur :eeeeeeeeeebeeeeebeebbbeeeeeebeeeee----eeeeeebeeeeeebeeeeeeebeeebeeeeeebeeebeeb: |